Conservation of cofitness between b0219 and b1253 in Escherichia coli BW25113

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) 1.0 b1253 yciA predicted hydrolase (NCBI) 0.16 11
Escherichia coli BL21 1.00 ECD_00214 putative NAD(P)-binding C-N hydrolase family amidase 1.00 ECD_01227 acyl-CoA esterase low > 60
Escherichia coli ECOR27 0.99 NOLOHH_02165 yafV 2-oxoglutaramate amidase 1.00 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA low > 57
Escherichia fergusonii Becca 0.98 EFB2_03798 Omega-amidase YafV 1.00 EFB2_02672 putative acyl-CoA thioester hydrolase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03420 Omega-amidase YafV 1.00 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase low > 73
Escherichia coli ECRC102 0.98 NIAGMN_07650 yafV 2-oxoglutaramate amidase 1.00 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA — —
Escherichia coli ECRC101 0.98 MCAODC_00310 yafV 2-oxoglutaramate amidase 1.00 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA — —
Escherichia coli ECRC98 0.98 JDDGAC_13415 yafV 2-oxoglutaramate amidase 1.00 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA — —
Escherichia coli ECRC101 0.98 OKFHMN_09790 yafV 2-oxoglutaramate amidase 1.00 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA — —
Escherichia coli ECRC62 0.98 BNILDI_00360 yafV 2-oxoglutaramate amidase 1.00 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA — —
Escherichia coli ECRC99 0.98 KEDOAH_18365 yafV 2-oxoglutaramate amidase 1.00 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS01735 2-oxoglutaramate amidase 1.00 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA low > 52
Escherichia coli ECOR38 0.98 HEPCGN_07895 yafV 2-oxoglutaramate amidase 1.00 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA low > 85
Enterobacter sp. TBS_079 0.87 MPMX20_00909 Omega-amidase YafV 0.89 MPMX20_02575 putative acyl-CoA thioester hydrolase low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS05465 amidohydrolase 0.87 BWI76_RS11790 acyl-CoA thioesterase low > 92
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2669 Predicted amidohydrolase 0.89 EX28DRAFT_0923 Acyl-CoA hydrolase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF4099 Aliphatic amidase AmiE (EC 3.5.1.4) 0.91 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis low > 78
Pantoea sp. MT58 0.74 IAI47_15230 amidohydrolase 0.76 IAI47_09135 acyl-CoA thioester hydrolase YciA low > 76
Dickeya dadantii 3937 0.71 DDA3937_RS16630 amidohydrolase 0.81 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA low > 74
Pectobacterium carotovorum WPP14 0.71 HER17_RS04570 amidohydrolase 0.84 HER17_RS10965 acyl-CoA thioester hydrolase YciA low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS16700 amidohydrolase 0.82 HGI48_RS10435 acyl-CoA thioester hydrolase YciA low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS17790 amidohydrolase 0.82 DZA65_RS10910 acyl-CoA thioester hydrolase YciA low > 75
Rahnella sp. WP5 0.69 EX31_RS21070 amidohydrolase 0.82 EX31_RS10010 acyl-CoA thioester hydrolase YciA low > 89
Serratia liquefaciens MT49 0.68 IAI46_04295 amidohydrolase 0.79 IAI46_14085 acyl-CoA thioester hydrolase YciA low > 86
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_15920 carbon-nitrogen hydrolase 0.43 AO353_09915 long-chain acyl-CoA thioester hydrolase low > 101
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.45 Psyr_5043 Thioesterase superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.45 Psyr_5043 Thioesterase superfamily low > 86
Pseudomonas sp. S08-1 0.47 OH686_17560 Aliphatic amidase AmiE 0.42 OH686_13400 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 80
Pseudomonas putida KT2440 0.47 PP_0859 putative ketoglutaramate omega-amidase 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase low > 96
Pseudomonas simiae WCS417 0.47 PS417_23115 carbon-nitrogen hydrolase 0.43 PS417_28095 long-chain acyl-CoA thioester hydrolase — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_3172 Aliphatic amidase AmiE (EC 3.5.1.4) 0.44 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 103
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_4855 Aliphatic amidase AmiE (EC 3.5.1.4) 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 87
Pseudomonas fluorescens SBW25 0.46 PFLU_RS24770 amidohydrolase 0.43 PFLU_RS29780 acyl-CoA thioesterase low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS24770 amidohydrolase 0.43 PFLU_RS29780 acyl-CoA thioesterase low > 109
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_06560 carbon-nitrogen hydrolase 0.44 AO356_11055 long-chain acyl-CoA thioester hydrolase low > 104
Pseudomonas sp. RS175 0.46 PFR28_00303 Omega-amidase YafV 0.44 PFR28_04491 putative acyl-CoA thioester hydrolase 0.19 83
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_848 Aliphatic amidase AmiE (EC 3.5.1.4) 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein — —
Pseudomonas stutzeri RCH2 0.44 Psest_1269 Predicted amidohydrolase 0.42 Psest_0218 Acyl-CoA hydrolase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF2535 FIG003879: Predicted amidohydrolase 0.44 GFF516 Acyl-CoA hydrolase (EC 3.1.2.20) low > 90
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS00080 carbon-nitrogen hydrolase family protein 0.43 QEN71_RS02095 acyl-CoA thioesterase low > 153
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS03545 apolipoprotein acyltransferase 0.42 BPHYT_RS03270 acyl-CoA hydrolase low > 109
Acidovorax sp. GW101-3H11 0.14 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.44 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) low > 79
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS05880 acyltransferase 0.40 RR42_RS02530 acyl-CoA hydrolase low > 128
Ralstonia solanacearum GMI1000 0.14 RS_RS13310 carbon-nitrogen hydrolase family protein 0.43 RS_RS02365 acyl-CoA thioesterase low > 80
Azospirillum brasilense Sp245 0.14 AZOBR_RS02920 amidohydrolase 0.48 AZOBR_RS22235 acyl-CoA thioester hydrolase low > 97
Castellaniella sp019104865 MT123 0.13 ABCV34_RS02585 carbon-nitrogen hydrolase family protein 0.40 ABCV34_RS09595 acyl-CoA thioesterase low > 48
Herbaspirillum seropedicae SmR1 0.13 HSERO_RS07150 apolipoprotein acyltransferase 0.40 HSERO_RS19275 acyl-CoA hydrolase low > 78
Marinobacter adhaerens HP15 0.12 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.42 HP15_3390 thioesterase superfamily protein low > 73
Acinetobacter radioresistens SK82 0.11 MPMX26_00580 Deaminated glutathione amidase 0.49 MPMX26_02646 putative acyl-CoA thioester hydrolase low > 36
Azospirillum sp. SherDot2 0.11 MPMX19_02429 Deaminated glutathione amidase 0.48 MPMX19_00971 putative acyl-CoA thioester hydrolase low > 112

Not shown: 23 genomes with orthologs for b0219 only; 21 genomes with orthologs for b1253 only