Conservation of cofitness between b0219 and b0711 in Escherichia coli BW25113

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) 1.0 b0711 ybgJ predicted enzyme subunit (NCBI) 0.19 4
Escherichia coli BL21 1.00 ECD_00214 putative NAD(P)-binding C-N hydrolase family amidase 1.00 ECD_00671 putative allophanate hydrolase, subunit 1 low > 60
Escherichia coli ECOR27 0.99 NOLOHH_02165 yafV 2-oxoglutaramate amidase 1.00 NOLOHH_23390 pxpB 5-oxoprolinase subunit PxpB low > 57
Escherichia fergusonii Becca 0.98 EFB2_03798 Omega-amidase YafV 0.99 EFB2_03392 5-oxoprolinase subunit B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03420 Omega-amidase YafV 1.00 OHPLBJKB_03006 putative protein YbgJ low > 73
Escherichia coli ECRC62 0.98 BNILDI_00360 yafV 2-oxoglutaramate amidase 0.99 BNILDI_21385 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC102 0.98 NIAGMN_07650 yafV 2-oxoglutaramate amidase 1.00 NIAGMN_05060 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC98 0.98 JDDGAC_13415 yafV 2-oxoglutaramate amidase 1.00 JDDGAC_10660 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC99 0.98 KEDOAH_18365 yafV 2-oxoglutaramate amidase 1.00 KEDOAH_20960 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC101 0.98 OKFHMN_09790 yafV 2-oxoglutaramate amidase 1.00 OKFHMN_07005 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC101 0.98 MCAODC_00310 yafV 2-oxoglutaramate amidase 1.00 MCAODC_26225 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS01735 2-oxoglutaramate amidase 0.99 ECOLIN_RS03805 5-oxoprolinase subunit PxpB low > 52
Escherichia coli ECOR38 0.98 HEPCGN_07895 yafV 2-oxoglutaramate amidase 1.00 HEPCGN_01205 pxpB 5-oxoprolinase subunit PxpB low > 85
Enterobacter sp. TBS_079 0.87 MPMX20_00909 Omega-amidase YafV 0.85 MPMX20_01345 5-oxoprolinase subunit B low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS05465 amidohydrolase 0.82 BWI76_RS08350 carboxylase low > 92
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2669 Predicted amidohydrolase 0.85 EX28DRAFT_2276 sensor histidine kinase inhibitor, KipI family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF4099 Aliphatic amidase AmiE (EC 3.5.1.4) 0.89 GFF4616 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) low > 78
Pantoea sp. MT58 0.74 IAI47_15230 amidohydrolase 0.75 IAI47_13805 5-oxoprolinase subunit PxpB low > 76
Pectobacterium carotovorum WPP14 0.71 HER17_RS04570 amidohydrolase 0.73 HER17_RS14985 5-oxoprolinase subunit PxpB low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS16630 amidohydrolase 0.73 DDA3937_RS06415 5-oxoprolinase subunit PxpB low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS16700 amidohydrolase 0.73 HGI48_RS06460 5-oxoprolinase subunit PxpB low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS17790 amidohydrolase 0.72 DZA65_RS06805 5-oxoprolinase subunit PxpB low > 75
Rahnella sp. WP5 0.69 EX31_RS21070 amidohydrolase 0.73 EX31_RS23385 5-oxoprolinase subunit PxpB low > 89
Serratia liquefaciens MT49 0.68 IAI46_04295 amidohydrolase 0.67 IAI46_06215 5-oxoprolinase subunit PxpB low > 86
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_15920 carbon-nitrogen hydrolase 0.26 AO353_18000 allophanate hydrolase 0.28 61
Pseudomonas sp. S08-1 0.47 OH686_17560 Aliphatic amidase AmiE 0.31 OH686_08745 Allophanate hydrolase 2 subunit 1 low > 80
Pseudomonas putida KT2440 0.47 PP_0859 putative ketoglutaramate omega-amidase 0.30 PP_4576 allophanate hydrolase subunit low > 96
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_3172 Aliphatic amidase AmiE (EC 3.5.1.4) 0.30 Pf6N2E2_2707 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) low > 103
Pseudomonas fluorescens SBW25 0.46 PFLU_RS24770 amidohydrolase 0.39 PFLU_RS19655 5-oxoprolinase subunit PxpB low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS24770 amidohydrolase 0.39 PFLU_RS19655 5-oxoprolinase subunit PxpB low > 109
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_06560 carbon-nitrogen hydrolase 0.30 AO356_04330 allophanate hydrolase low > 104
Pseudomonas sp. RS175 0.46 PFR28_00303 Omega-amidase YafV 0.28 PFR28_00729 5-oxoprolinase subunit B low > 88
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_848 Aliphatic amidase AmiE (EC 3.5.1.4) 0.26 Pf1N1B4_3367 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) low > 87
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_06395 nit2 amidohydrolase 0.30 OKGIIK_04740 pxpB 5-oxoprolinase subunit PxpB low > 52
Pseudomonas stutzeri RCH2 0.44 Psest_1269 Predicted amidohydrolase 0.27 Psest_1541 TIGR00370 family protein low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_15860 amidohydrolase 0.41 CA264_08800 kinase inhibitor low > 74
Lysobacter sp. OAE881 0.42 ABIE51_RS08740 amidohydrolase 0.34 ABIE51_RS08145 5-oxoprolinase subunit PxpB low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS03405 amidohydrolase 0.34 ABZR88_RS12615 5-oxoprolinase subunit PxpB low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS08135 amidohydrolase 0.31 CA265_RS10110 hypothetical protein low > 88
Kangiella aquimarina DSM 16071 0.17 B158DRAFT_2071 Predicted amidohydrolase 0.35 B158DRAFT_1993 TIGR00370 family protein low > 40
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS00080 carbon-nitrogen hydrolase family protein 0.53 QEN71_RS28650 5-oxoprolinase subunit PxpB low > 153
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS03545 apolipoprotein acyltransferase 0.52 BPHYT_RS18625 allophanate hydrolase low > 109
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS05880 acyltransferase 0.51 RR42_RS00640 allophanate hydrolase low > 128
Rhodopseudomonas palustris CGA009 0.14 TX73_003100 carbon-nitrogen hydrolase family protein 0.27 TX73_013905 5-oxoprolinase subunit PxpB low > 86
Ralstonia solanacearum GMI1000 0.14 RS_RS13310 carbon-nitrogen hydrolase family protein 0.51 RS_RS10895 hypothetical protein low > 80
Herbaspirillum seropedicae SmR1 0.13 HSERO_RS07150 apolipoprotein acyltransferase 0.48 HSERO_RS08790 hypothetical protein low > 78
Marinobacter adhaerens HP15 0.12 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.30 HP15_2686 allophanate hydrolase subunit 1 low > 73
Shewanella loihica PV-4 0.12 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.49 Shew_0008 allophanate hydrolase subunit 1 (RefSeq) low > 60
Azospirillum sp. SherDot2 0.11 MPMX19_02429 Deaminated glutathione amidase 0.35 MPMX19_04956 5-oxoprolinase subunit B low > 112

Not shown: 24 genomes with orthologs for b0219 only; 13 genomes with orthologs for b0711 only