Conservation of cofitness between b2616 and b0577 in Escherichia coli BW25113

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2616 recN recombination and repair protein (NCBI) 1.0 b0577 ybdG predicted mechanosensitive channel (NCBI) 0.41 18
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01091 DNA repair protein RecN 1.00 OHPLBJKB_03132 Miniconductance mechanosensitive channel YbdG low > 73
Escherichia coli ECRC62 1.00 BNILDI_11620 recN DNA repair protein RecN 1.00 BNILDI_22065 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECOR27 1.00 NOLOHH_12815 recN DNA repair protein RecN 1.00 NOLOHH_24055 ybdG mechanosensitive ion channel YbdG low > 57
Escherichia coli BL21 1.00 ECD_02504 recombination and repair protein 1.00 ECD_00538 mechanosensitive channel protein, miniconductance low > 60
Escherichia coli ECRC101 0.99 OKFHMN_21145 recN DNA repair protein RecN 1.00 OKFHMN_07675 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECRC99 0.99 KEDOAH_07075 recN DNA repair protein RecN 1.00 KEDOAH_20295 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECRC102 0.99 NIAGMN_18915 recN DNA repair protein RecN 1.00 NIAGMN_05730 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECRC101 0.99 MCAODC_11670 recN DNA repair protein RecN 1.00 MCAODC_26890 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECOR38 0.99 HEPCGN_20265 recN DNA repair protein RecN 1.00 HEPCGN_00615 ybdG mechanosensitive ion channel YbdG low > 85
Escherichia fergusonii Becca 0.99 EFB2_01277 DNA repair protein RecN 1.00 EFB2_03517 Miniconductance mechanosensitive channel YbdG low > 86
Escherichia coli ECRC98 0.99 JDDGAC_24810 recN DNA repair protein RecN 1.00 JDDGAC_11320 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14775 DNA repair protein RecN 1.00 ECOLIN_RS03155 mechanosensitive ion channel YbdG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4162 DNA repair protein RecN 0.90 GFF4472 Uncharacterized protein ybdG low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2719 DNA repair protein RecN 0.85 EX28DRAFT_2431 Small-conductance mechanosensitive channel low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03486 DNA repair protein RecN 0.84 MPMX20_01129 Miniconductance mechanosensitive channel YbdG low > 85
Klebsiella michiganensis M5al 0.84 BWI76_RS21560 DNA repair protein RecN 0.83 BWI76_RS07440 miniconductance mechanosensitive channel low > 92
Serratia liquefaciens MT49 0.77 IAI46_19635 DNA repair protein RecN 0.60 IAI46_04810 mechanosensitive ion channel low > 86
Pantoea sp. MT58 0.77 IAI47_04810 DNA repair protein RecN 0.28 IAI47_10645 mechanosensitive ion channel low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS16985 recN DNA repair protein RecN 0.53 LU632_RS06755 mechanosensitive ion channel family protein low > 74
Pectobacterium carotovorum WPP14 0.72 HER17_RS17420 DNA repair protein RecN 0.58 HER17_RS16010 mechanosensitive ion channel low > 75
Shewanella oneidensis MR-1 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.43 SO0121 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1104 recombination and repair protein (RefSeq) 0.43 Shewana3_0117 MscS mechanosensitive ion channel (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.43 Sama_3632 putative small-conductance mechanosensitive channel (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.42 Shew_3752 MscS mechanosensitive ion channel (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_04395 DNA repair protein RecN 0.54 CSW01_01370 mechanosensitive ion channel family protein low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_01443 Recombination protein N 0.39 MIT1002_03422 Miniconductance mechanosensitive channel low > 70
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_5106 DNA repair protein RecN 0.39 PfGW456L13_4452 Small-conductance mechanosensitive channel low > 87
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1178 DNA repair protein RecN 0.38 Pf1N1B4_544 Small-conductance mechanosensitive channel low > 87
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3370 DNA repair protein RecN 0.36 Pf6N2E2_2677 Small-conductance mechanosensitive channel low > 103
Pseudomonas sp. RS175 0.39 PFR28_00071 DNA repair protein RecN 0.39 PFR28_00755 Miniconductance mechanosensitive channel YbdG low > 88
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS25910 DNA repair protein RecN 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_07510 DNA repair protein RecN 0.37 AO356_04215 mechanosensitive ion channel protein MscS low > 104
Pseudomonas fluorescens SBW25 0.38 PFLU_RS25910 DNA repair protein RecN 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_05660 DNA repair protein RecN 0.38 AO353_18300 mechanosensitive ion channel protein MscS low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4197 DNA replication and repair protein RecN 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4197 DNA replication and repair protein RecN 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas stutzeri RCH2 0.38 Psest_0962 DNA repair protein RecN 0.40 Psest_1281 Small-conductance mechanosensitive channel low > 67
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS26535 DNA repair protein RecN 0.27 QEN71_RS37970 mechanosensitive ion channel low > 153
Pseudomonas putida KT2440 0.37 PP_4729 factor used in recombination and DNA repair 0.38 PP_4533 mechanosensitive channel of miniconductance low > 96
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0601 DNA replication and repair protein RecN 0.58 B158DRAFT_2238 Small-conductance mechanosensitive channel low > 40
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS03560 DNA repair protein 0.29 BPHYT_RS30840 small mechanosensitive ion channel protein MscS low > 109
Acinetobacter radioresistens SK82 0.29 MPMX26_00239 DNA repair protein RecN 0.37 MPMX26_01489 Miniconductance mechanosensitive channel YbdG — —
Bacteroides thetaiotaomicron VPI-5482 0.25 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) 0.40 BT4053 putative membrane transport protein (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS02000 DNA repair protein RecN 0.39 HMPREF1078_RS02480 mechanosensitive ion channel low > 61
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS10900 DNA repair protein RecN 0.39 HMPREF1181_RS09075 mechanosensitive ion channel low > 56
Bacteroides ovatus ATCC 8483 0.24 BACOVA_00200 DNA repair protein RecN 0.39 BACOVA_04843 transporter, small conductance mechanosensitive ion channel MscS family protein low > 94
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS18225 DNA repair protein RecN 0.35 HMPREF1058_RS02435 mechanosensitive ion channel low > 67
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS14500 DNA repair protein RecN 0.36 ABI39_RS01685 mechanosensitive ion channel low > 72
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_13235 DNA repair protein RecN 0.36 CA264_02745 mechanosensitive ion channel protein MscS low > 74

Not shown: 50 genomes with orthologs for b2616 only; 0 genomes with orthologs for b0577 only