| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2667 | ygaV | predicted DNA-binding transcriptional regulator (NCBI) | 1.0 | b0426 | yajQ | orf, hypothetical protein (VIMSS) | 0.22 | 16 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01065 | | putative HTH-type transcriptional regulator YgaV | 1.00 | OHPLBJKB_03250 | | hypothetical protein | low | > 73 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_20180 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | HEPCGN_07020 | yajQ | nucleotide binding protein YajQ | low | > 85 |
| Escherichia coli BL21 | 1.00 | ECD_02523 | | tributyltin-inducible repressor of ygaVP | 1.00 | ECD_00374 | | phage Phi6 host factor, ATP/GTP binding protein | low | > 60 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_12710 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | NOLOHH_01340 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_11270 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | BNILDI_22755 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_01263 | | putative HTH-type transcriptional regulator YgaV | 1.00 | EFB2_03631 | | hypothetical protein | low | > 86 |
| Escherichia coli ECRC102 | 0.98 | NIAGMN_18650 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | NIAGMN_06445 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia coli ECRC101 | 0.98 | MCAODC_11405 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | MCAODC_27615 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia coli ECRC98 | 0.98 | JDDGAC_24545 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | JDDGAC_12045 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia coli ECRC101 | 0.98 | OKFHMN_20885 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | OKFHMN_08390 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia coli ECRC99 | 0.98 | KEDOAH_07255 | ygaV | putative HTH-type transcriptional regulator YgaV | 1.00 | KEDOAH_19575 | yajQ | nucleotide binding protein YajQ | — | — |
| Escherichia coli Nissle 1917 | 0.96 | ECOLIN_RS14870 | | metalloregulator ArsR/SmtB family transcription factor | 1.00 | ECOLIN_RS02565 | | nucleotide binding protein YajQ | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.90 | GFF1572 | | Transcriptional regulator, ArsR family | 0.91 | GFF4337 | | FIG001943: hypothetical protein YajQ | low | > 78 |
| Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_2752 | | Predicted transcriptional regulators | 0.92 | EX28DRAFT_2545 | | Uncharacterized protein conserved in bacteria | low | > 76 |
| Enterobacter sp. TBS_079 | 0.80 | MPMX20_03547 | | putative HTH-type transcriptional regulator YgaV | 0.91 | MPMX20_01017 | | hypothetical protein | low | > 85 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS21995 | | transcriptional regulator | 0.92 | BWI76_RS06410 | | YajQ family cyclic di-GMP-binding protein | low | > 92 |
| Rahnella sp. WP5 | 0.61 | EX31_RS21725 | | helix-turn-helix transcriptional regulator | 0.79 | EX31_RS22185 | | YajQ family cyclic di-GMP-binding protein | low | > 89 |
| Pantoea sp. MT58 | 0.59 | IAI47_19710 | | helix-turn-helix transcriptional regulator | 0.78 | IAI47_14710 | | YajQ family cyclic di-GMP-binding protein | low | > 76 |
| Magnetospirillum magneticum AMB-1 | 0.47 | AMB_RS14620 | | ArsR family transcriptional regulator | 0.43 | AMB_RS18375 | | nucleotide-binding protein | low | > 64 |
| Shewanella amazonensis SB2B | 0.44 | Sama_0920 | | transcriptional regulator HlyU (RefSeq) | 0.60 | Sama_2557 | | putative nucleotide-binding protein (RefSeq) | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF3245 | | Transcriptional regulator, ArsR family | 0.44 | GFF292 | | FIG001943: hypothetical protein YajQ | — | — |
| Shewanella oneidensis MR-1 | 0.43 | SO3538 | hlyU | transcriptional regulator HlyU (NCBI ptt file) | 0.63 | SO3815 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_3141 | | ArsR family transcriptional regulator (RefSeq) | 0.65 | Shewana3_0782 | | putative nucleotide-binding protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.42 | Shew_1095 | | ArsR family transcriptional regulator (RefSeq) | 0.61 | Shew_2893 | | nucleotide-binding protein (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_17420 | | transcriptional regulator | 0.61 | CSW01_07570 | | nucleotide-binding protein | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS03345 | | metalloregulator ArsR/SmtB family transcription factor | 0.79 | HER17_RS15905 | | YajQ family cyclic di-GMP-binding protein | low | > 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_4483 | | Transcriptional regulator, ArsR family | 0.45 | Pf1N1B4_650 | | FIG001943: hypothetical protein YajQ | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_26620 | | ArsR family transcriptional regulator | 0.46 | AO353_03640 | | nucleotide-binding protein | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_3537 | | Transcriptional regulator, ArsR family | 0.46 | PfGW456L13_1840 | | FIG001943: hypothetical protein YajQ | — | — |
| Pseudomonas simiae WCS417 | 0.39 | PS417_17530 | | ArsR family transcriptional regulator | 0.46 | PS417_22510 | | nucleotide-binding protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_1782 | | Predicted transcriptional regulators | 0.47 | Psest_1142 | | Uncharacterized protein conserved in bacteria | low | > 67 |
| Acidovorax sp. GW101-3H11 | 0.35 | Ac3H11_2264 | | Transcriptional regulator, ArsR family | 0.43 | Ac3H11_2620 | | FIG001943: hypothetical protein YajQ | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.34 | LRK54_RS07735 | | metalloregulator ArsR/SmtB family transcription factor | 0.45 | LRK54_RS14675 | | YajQ family cyclic di-GMP-binding protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.34 | LRK55_RS07465 | | metalloregulator ArsR/SmtB family transcription factor | 0.46 | LRK55_RS14390 | | YajQ family cyclic di-GMP-binding protein | low | > 63 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS01430 | | metalloregulator ArsR/SmtB family transcription factor | 0.45 | ABCV34_RS15080 | | YajQ family cyclic di-GMP-binding protein | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.33 | H281DRAFT_02691 | | transcriptional regulator, ArsR family | 0.38 | H281DRAFT_04122 | | hypothetical protein | — | — |
| Serratia liquefaciens MT49 | 0.33 | IAI46_09640 | | winged helix-turn-helix transcriptional regulator | 0.78 | IAI46_04955 | | YajQ family cyclic di-GMP-binding protein | low | > 86 |
| Kangiella aquimarina DSM 16071 | 0.33 | B158DRAFT_0345 | | transcriptional regulator, ArsR family | 0.63 | B158DRAFT_0029 | | Uncharacterized protein conserved in bacteria | — | — |
| Dechlorosoma suillum PS | 0.32 | Dsui_1272 | | putative transcriptional regulator | 0.38 | Dsui_3245 | | hypothetical protein | low | > 51 |
| Dickeya dianthicola ME23 | 0.30 | DZA65_RS01015 | | helix-turn-helix transcriptional regulator | 0.76 | DZA65_RS05945 | | YajQ family cyclic di-GMP-binding protein | low | > 75 |
| Variovorax sp. SCN45 | 0.30 | GFF6927 | | Transcriptional regulator, ArsR family | 0.44 | GFF3099 | | UPF0234 protein Yitk | — | — |
| Dickeya dianthicola 67-19 | 0.30 | HGI48_RS00955 | | helix-turn-helix transcriptional regulator | 0.77 | HGI48_RS05620 | | YajQ family cyclic di-GMP-binding protein | — | — |
| Dickeya dadantii 3937 | 0.29 | DDA3937_RS20270 | | helix-turn-helix transcriptional regulator | 0.76 | DDA3937_RS05560 | | YajQ family cyclic di-GMP-binding protein | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.29 | MPMX26_01494 | | Biofilm growth-associated repressor | 0.46 | MPMX26_02644 | | hypothetical protein | low | > 36 |
| Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS35445 | | ArsR family transcriptional regulator | 0.39 | RR42_RS17155 | | nucleotide-binding protein | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.28 | CA264_11085 | | transcriptional regulator | 0.39 | CA264_15545 | | YajQ family cyclic di-GMP-binding protein | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_02372 | | Biofilm growth-associated repressor | 0.56 | MIT1002_04129 | | putative nucleotide-binding protein | low | > 70 |
Not shown: 8 genomes with orthologs for b2667 only; 33 genomes with orthologs for b0426 only