Conservation of cofitness between b2029 and b0078 in Escherichia coli BW25113

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) 1.0 b0078 ilvH acetolactate synthase small subunit (NCBI) 0.55 9
Escherichia coli ECOR27 1.00 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase 0.99 NOLOHH_03040 ilvN acetolactate synthase small subunit low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase 0.99 ECOLIN_RS00420 acetolactate synthase small subunit low > 52
Escherichia fergusonii Becca 1.00 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating 0.99 EFB2_03968 Acetolactate synthase isozyme 3 small subunit low > 86
Escherichia coli ECRC99 1.00 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase 0.98 KEDOAH_17460 ilvN acetolactate synthase small subunit
Escherichia coli ECRC101 1.00 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase 0.98 MCAODC_01210 ilvN acetolactate synthase small subunit
Escherichia coli ECRC98 1.00 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase 0.98 JDDGAC_14290 ilvN acetolactate synthase small subunit
Escherichia coli ECRC102 1.00 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase 0.98 NIAGMN_08545 ilvN acetolactate synthase small subunit
Escherichia coli ECRC101 1.00 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase 0.98 OKFHMN_10695 ilvN acetolactate synthase small subunit
Escherichia coli ECRC62 0.99 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase 0.99 BNILDI_08570 ilvN acetolactate synthase small subunit
Escherichia coli BL21 0.99 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating 1.00 ECD_00080 acetolactate synthase 3, small subunit, valine-sensitive low > 60
Escherichia coli ECOR38 0.99 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase 0.99 HEPCGN_08675 ilvN acetolactate synthase small subunit low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.98 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating 0.99 OHPLBJKB_03580 Acetolactate synthase isozyme 3 small subunit low > 73
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) 0.94 EX28DRAFT_3674 acetolactate synthase, small subunit (EC 2.2.1.6) low > 76
Enterobacter sp. TBS_079 0.96 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating 0.96 MPMX20_00772 Acetolactate synthase isozyme 3 small subunit low > 85
Klebsiella michiganensis M5al 0.95 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.97 BWI76_RS04700 acetolactate synthase small subunit low > 92
Serratia liquefaciens MT49 0.89 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase 0.91 IAI46_03380 acetolactate synthase small subunit
Pantoea sp. MT58 0.89 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase 0.94 IAI47_15985 acetolactate synthase small subunit
Dickeya dadantii 3937 0.89 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase 0.92 DDA3937_RS18100 acetolactate synthase small subunit low > 74
Pectobacterium carotovorum WPP14 0.88 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase 0.91 HER17_RS03100 acetolactate synthase small subunit low > 75
Rahnella sp. WP5 0.88 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase 0.93 EX31_RS03660 acetolactate synthase small subunit
Dickeya dianthicola ME23 0.88 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase 0.91 DZA65_RS19180 acetolactate synthase small subunit low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase 0.91 HGI48_RS18035 acetolactate synthase small subunit low > 71
Erwinia tracheiphila SCR3 0.87 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase 0.91 LU632_RS02890 ilvN acetolactate synthase small subunit low > 74
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase 0.60 QEN71_RS24220 acetolactate synthase small subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) 0.60 H281DRAFT_04552 acetolactate synthase, small subunit low > 103
Paraburkholderia graminis OAS925 0.74 ABIE53_005122 6-phosphogluconate dehydrogenase 0.60 ABIE53_001575 acetolactate synthase-1/3 small subunit low > 113
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS29625 6-phosphogluconate dehydrogenase 0.60 BPHYT_RS06550 acetolactate synthase low > 109
Synechococcus elongatus PCC 7942 0.57 Synpcc7942_0039 gnd 6-phosphogluconate dehydrogenase 0.40 Synpcc7942_2434 ilvH acetolactate synthase 3 regulatory subunit
Variovorax sp. SCN45 0.55 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 0.58 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) low > 127
Variovorax sp. OAS795 0.55 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.59 ABID97_RS14890 acetolactate synthase small subunit low > 91
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.71 CSW01_12560 acetolactate synthase small subunit low > 62
Mycobacterium tuberculosis H37Rv 0.54 Rv1844c Probable 6-phosphogluconate dehydrogenase Gnd1 0.39 Rv3002c Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS)
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_4222 6-phosphogluconate dehydrogenase, decarboxylating 0.21 Echvi_2057 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) 0.39 30
Bifidobacterium breve UCC2003 0.53 BBR_RS11465 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.40 BBR_RS12345 acetolactate synthase small subunit
Parabacteroides merdae CL09T00C40 0.52 HMPREF1078_RS08640 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.18 HMPREF1078_RS16685 acetolactate synthase small subunit low > 61
Phocaeicola dorei CL03T12C01 0.48 ABI39_RS14350 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.20 ABI39_RS12725 acetolactate synthase small subunit low > 72
Bacteroides ovatus ATCC 8483 0.48 BACOVA_00509 phosphogluconate dehydrogenase (decarboxylating) 0.20 BACOVA_03304 acetolactate synthase, small subunit low > 94
Phocaeicola vulgatus CL09T03C04 0.47 HMPREF1058_RS18025 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 0.20 HMPREF1058_RS16825 acetolactate synthase small subunit low > 67
Sinorhizobium meliloti 1021 0.47 SMc04262 6-phosphogluconate dehydrogenase 0.39 SMc01430 acetolactate synthase 3 regulatory subunit low > 103
Rhizobium sp. OAE497 0.46 ABIE40_RS11035 NADP-dependent phosphogluconate dehydrogenase 0.39 ABIE40_RS11490 acetolactate synthase small subunit low > 107
Agrobacterium fabrum C58 0.46 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating 0.40 Atu2035 acetolactate synthase, small subunit low > 89
Alteromonas macleodii MIT1002 0.46 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating 0.62 MIT1002_00504 Acetolactate synthase isozyme 3 small subunit low > 70
Azospirillum brasilense Sp245 0.43 AZOBR_RS15725 6-phosphogluconate dehydrogenase 0.39 AZOBR_RS06565 acetolactate synthase low > 97
Shewanella sp. ANA-3 0.43 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) 0.74 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) 0.53 26
Shewanella oneidensis MR-1 0.43 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) 0.74 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file)
Shewanella amazonensis SB2B 0.43 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq) 0.74 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 62
Shewanella loihica PV-4 0.43 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq) 0.75 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq) low > 60

Not shown: 5 genomes with orthologs for b2029 only; 41 genomes with orthologs for b0078 only