| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2903 | gcvP | glycine dehydrogenase (NCBI) | 1.0 | b0059 | hepA | ATP-dependent helicase HepA (NCBI) | 0.47 | 8 |
| Escherichia coli BL21 | 1.00 | ECD_02735 | | glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex | 1.00 | ECD_00061 | | RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase | low | > 60 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_09980 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | BNILDI_08460 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_23170 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | JDDGAC_14395 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_19530 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | OKFHMN_10800 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_17295 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | NIAGMN_08650 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_08610 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | KEDOAH_17355 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00812 | | Glycine dehydrogenase (decarboxylating) | 1.00 | OHPLBJKB_03599 | | RNA polymerase-associated protein RapA | low | > 73 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_10050 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | MCAODC_01315 | rapA | RNA polymerase-associated protein RapA | — | — |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS16165 | | aminomethyl-transferring glycine dehydrogenase | 1.00 | ECOLIN_RS00315 | | RNA polymerase-associated protein RapA | low | > 52 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_18820 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | HEPCGN_08790 | rapA | RNA polymerase-associated protein RapA | low | > 85 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_11445 | gcvP | aminomethyl-transferring glycine dehydrogenase | 1.00 | NOLOHH_03145 | rapA | RNA polymerase-associated protein RapA | low | > 57 |
| Escherichia fergusonii Becca | 0.99 | EFB2_00999 | | Glycine dehydrogenase (decarboxylating) | 1.00 | EFB2_03986 | | RNA polymerase-associated protein RapA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF3003 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.94 | GFF183 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.89 | MPMX20_03762 | | Glycine dehydrogenase (decarboxylating) | 0.92 | MPMX20_00753 | | RNA polymerase-associated protein RapA | low | > 85 |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS23870 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.92 | BWI76_RS04570 | | RNA polymerase-associated protein RapA | low | > 92 |
| Enterobacter asburiae PDN3 | 0.88 | EX28DRAFT_2955 | | glycine dehydrogenase (decarboxylating) | 0.92 | EX28DRAFT_3651 | | Superfamily II DNA/RNA helicases, SNF2 family | low | > 76 |
| Pantoea sp. MT58 | 0.82 | IAI47_03775 | | aminomethyl-transferring glycine dehydrogenase | 0.84 | IAI47_16055 | | RNA polymerase-associated protein RapA | low | > 76 |
| Serratia liquefaciens MT49 | 0.82 | IAI46_20850 | | aminomethyl-transferring glycine dehydrogenase | 0.84 | IAI46_03275 | | RNA polymerase-associated protein RapA | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.81 | LU632_RS05915 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.83 | LU632_RS02805 | rapA | RNA polymerase-associated protein RapA | low | > 74 |
| Rahnella sp. WP5 | 0.81 | EX31_RS21520 | | aminomethyl-transferring glycine dehydrogenase | 0.80 | EX31_RS03745 | | RNA polymerase-associated protein RapA | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.80 | HER17_RS17995 | | aminomethyl-transferring glycine dehydrogenase | 0.78 | HER17_RS02990 | | RNA polymerase-associated protein RapA | low | > 75 |
| Dickeya dadantii 3937 | 0.80 | DDA3937_RS03255 | | aminomethyl-transferring glycine dehydrogenase | 0.79 | DDA3937_RS18235 | | RNA polymerase-associated protein RapA | low | > 74 |
| Dickeya dianthicola ME23 | 0.80 | DZA65_RS03445 | | aminomethyl-transferring glycine dehydrogenase | 0.78 | DZA65_RS19310 | | RNA polymerase-associated protein RapA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS03400 | | aminomethyl-transferring glycine dehydrogenase | 0.78 | HGI48_RS18170 | | RNA polymerase-associated protein RapA | low | > 71 |
| Shewanella amazonensis SB2B | 0.68 | Sama_2719 | | glycine dehydrogenase (RefSeq) | 0.60 | Sama_3131 | | ATP-dependent helicase HepA (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.68 | MIT1002_02971 | | Glycine dehydrogenase [decarboxylating] | 0.44 | MIT1002_00659 | | RNA polymerase-associated protein RapA | low | > 70 |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_3499 | | glycine dehydrogenase (RefSeq) | 0.60 | Shewana3_0574 | | ATP-dependent helicase HepA (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.67 | SO0781 | gcvP | glycine cleavage system P protein (NCBI ptt file) | 0.59 | SO0575 | hepA | RNA polymerase-associated protein HepA (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.66 | Shew_3062 | | glycine dehydrogenase (RefSeq) | 0.59 | Shew_0457 | | ATP-dependent helicase HepA (RefSeq) | low | > 60 |
| Pseudomonas sp. S08-1 | 0.63 | OH686_11165 | | glycine dehydrogenase | 0.48 | OH686_19955 | | RNA polymerase associated protein RapA | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_2236 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.48 | Pf1N1B4_3224 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_08720 | | glycine dehydrogenase | 0.48 | AO353_17155 | | RNA polymerase-associated protein RapA | 0.32 | 1 |
| Pseudomonas stutzeri RCH2 | 0.62 | Psest_0183 | | glycine dehydrogenase (decarboxylating) | 0.48 | Psest_1327 | | Superfamily II DNA/RNA helicases, SNF2 family | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_904 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.48 | PfGW456L13_4599 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 87 |
| Pseudomonas putida KT2440 | 0.61 | PP_5192 | | glycine dehydrogenase | 0.48 | PP_1145 | | RNA polymerase-associated protein RapA | low | > 96 |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_15330 | | glycine dehydrogenase (decarboxylating) | 0.65 | CSW01_12705 | | RNA polymerase-associated protein RapA | low | > 62 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | 0.48 | Psyr_3842 | | SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | 0.48 | Psyr_3842 | | SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit | low | > 86 |
| Rhodanobacter denitrificans MT42 | 0.56 | LRK55_RS00260 | | aminomethyl-transferring glycine dehydrogenase | 0.33 | LRK55_RS02635 | | RNA polymerase-associated protein RapA | low | > 63 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_03383 | | Glycine dehydrogenase (decarboxylating) | 0.48 | PFR28_00612 | | RNA polymerase-associated protein RapA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_5558 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.48 | Pf6N2E2_2845 | | RNA polymerase associated protein RapA (EC 3.6.1.-) | low | > 103 |
| Dyella japonica UNC79MFTsu3.2 | 0.56 | ABZR86_RS08305 | | aminomethyl-transferring glycine dehydrogenase | 0.32 | ABZR86_RS09245 | | RNA polymerase-associated protein RapA | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_18170 | | glycine dehydrogenase | 0.48 | AO356_04975 | | RNA polymerase-associated protein RapA | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS24000 | | aminomethyl-transferring glycine dehydrogenase | 0.48 | PFLU_RS06675 | | RNA polymerase-associated protein RapA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS24000 | | aminomethyl-transferring glycine dehydrogenase | 0.48 | PFLU_RS06675 | | RNA polymerase-associated protein RapA | low | > 109 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_22360 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.47 | PS417_06645 | | RNA polymerase-associated protein RapA | low | > 88 |
| Rhodanobacter denitrificans FW104-10B01 | 0.56 | LRK54_RS00520 | | aminomethyl-transferring glycine dehydrogenase | 0.33 | LRK54_RS02885 | | RNA polymerase-associated protein RapA | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.55 | OKGIIK_06740 | gcvP2 | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain | 0.33 | OKGIIK_09865 | rapA | RNA polymerase-associated protein RapA | low | > 52 |
Not shown: 37 genomes with orthologs for b2903 only; 2 genomes with orthologs for b0059 only