Conservation of cofitness between Rru_A1435 and Rru_A1607 in Rhodospirillum rubrum S1H

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1435 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) 1.0 Rru_A1607 4-alpha-glucanotransferase (NCBI) 0.74 9
Azospirillum brasilense Sp245 0.51 AZOBR_RS21130 Fis family transcriptional regulator 0.36 AZOBR_RS09480 4-alpha-glucanotransferase low > 97
Escherichia fergusonii Becca 0.50 EFB2_04538 C4-dicarboxylate transport transcriptional regulatory protein DctD 0.25 EFB2_00412 4-alpha-glucanotransferase low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS23460 sigma-54 dependent transcriptional regulator 0.26 ECOLIN_RS19510 4-alpha-glucanotransferase low > 55
Pseudomonas stutzeri RCH2 0.49 Psest_4132 alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) 0.25 Psest_2170 4-alpha-glucanotransferase low > 67
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3995 Helix-turn-helix, Fis-type 0.26 Psyr_2994 Glycoside hydrolase, family 77 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3995 Helix-turn-helix, Fis-type 0.26 Psyr_2994 Glycoside hydrolase, family 77 low > 86
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS16810 Fis family transcriptional regulator 0.22 HSERO_RS12495 4-alpha-glucanotransferase low > 78
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS06635 sigma-54 dependent transcriptional regulator 0.26 ABZR87_RS17200 4-alpha-glucanotransferase low > 80
Pseudomonas sp. S08-1 0.48 OH686_14355 C4-dicarboxylate transport transcriptional regulatory protein 0.24 OH686_01290 4-alpha-glucanotransferase low > 80
Pseudomonas putida KT2440 0.48 PP_1401 C4-dicarboxylate transport transcriptional regulatory protein 0.23 PP_4052 4-alpha-glucanotransferase low > 96
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_5487 Nitrogen regulation protein NR(I) 0.26 Pf6N2E2_1076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) low > 103
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_17800 C4-dicarboxylate ABC transporter 0.25 AO356_26015 4-alpha-glucanotransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_16265 Fis family transcriptional regulator 0.25 AO353_23765 4-alpha-glucanotransferase low > 101
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_09635 sigma-54-dependent Fis family transcriptional regulator 0.29 CSW01_14120 4-alpha-glucanotransferase low > 62
Paraburkholderia graminis OAS925 0.47 ABIE53_000648 two-component system C4-dicarboxylate transport response regulator DctD 0.26 ABIE53_004823 4-alpha-glucanotransferase low > 113
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_401 C4-dicarboxylate transport transcriptional regulatory protein 0.25 PfGW456L13_3247 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) low > 87
Pseudomonas sp. RS175 0.47 PFR28_03462 C4-dicarboxylate transport transcriptional regulatory protein DctD 0.25 PFR28_02147 4-alpha-glucanotransferase low > 88
Ralstonia solanacearum GMI1000 0.47 RS_RS01635 sigma-54-dependent Fis family transcriptional regulator 0.24 RS_RS18290 4-alpha-glucanotransferase low > 80
Pseudomonas simiae WCS417 0.47 PS417_05535 Fis family transcriptional regulator 0.26 PS417_14490 4-alpha-glucanotransferase low > 88
Magnetospirillum magneticum AMB-1 0.47 AMB_RS08380 sigma-54-dependent Fis family transcriptional regulator 0.35 AMB_RS15420 4-alpha-glucanotransferase low > 64
Ralstonia solanacearum PSI07 0.47 RPSI07_RS22520 sigma-54-dependent Fis family transcriptional regulator 0.25 RPSI07_RS00870 4-alpha-glucanotransferase low > 81
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1666 C4-dicarboxylate transport transcriptional regulatory protein 0.24 Pf1N1B4_4685 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) low > 87
Ralstonia solanacearum UW163 0.47 UW163_RS02785 sigma-54-dependent Fis family transcriptional regulator 0.23 UW163_RS22865 4-alpha-glucanotransferase
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS10795 sigma-54-dependent Fis family transcriptional regulator 0.23 RALBFv3_RS22320 4-alpha-glucanotransferase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_02037 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family 0.26 H281DRAFT_06053 4-alpha-glucanotransferase low > 103
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator 0.26 PFLU_RS16420 4-alpha-glucanotransferase low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator 0.26 PFLU_RS16420 4-alpha-glucanotransferase low > 109
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS02520 Fis family transcriptional regulator 0.26 BPHYT_RS33795 4-alpha-glucanotransferase low > 109
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS01375 sigma-54 dependent transcriptional regulator 0.27 QEN71_RS17715 4-alpha-glucanotransferase low > 153
Shewanella loihica PV-4 0.45 Shew_1442 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.20 Shew_1167 4-alpha-glucanotransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_2213 response regulator receiver protein (RefSeq) 0.18 Sama_2454 4-alpha-glucanotransferase (RefSeq) low > 62

Not shown: 21 genomes with orthologs for Rru_A1435 only; 26 genomes with orthologs for Rru_A1607 only