| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_861 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_27455 | | LysR family transcriptional regulator | insig. | 99 | 96 |
| o | Pseudomonas putida KT2440 | PP_2833 | | Transcriptional regulator, LysR family | insig. | 58 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS05600 | | LysR family transcriptional regulator | insig. | 58 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1666 | | Transcriptional regulator, LysR family | strong | 56 | 90 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28750 | | LysR family transcriptional regulator | no data | 55 | 88 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05435 | | DNA-binding transcriptional regulator, LysR family | sig. | 37 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28230 | | LysR family transcriptional regulator | no data | 37 | 91 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3526 | | Transcriptional regulator, LysR family | insig. | 37 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_005694 | | DNA-binding transcriptional LysR family regulator | strong | 37 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12630 | | LysR family transcriptional regulator | strong | 37 | 90 |
| | Xanthobacter sp. DMC5 | GFF2143 | | HTH-type transcriptional regulator GbpR | insig. | 38 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01226 | | transcriptional regulator, LysR family | no data | 37 | 91 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06875 | | LysR family transcriptional regulator | strong | 33 | 86 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS33955 | | LysR family transcriptional regulator | insig. | 38 | 83 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26165 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1106 | | Chromosome initiation inhibitor | insig. | 30 | 88 |
| o | Variovorax sp. OAS795 | ABID97_RS09990 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| | Variovorax sp. SCN45 | GFF5191 | | Galactose-binding protein regulator | insig. | 34 | 81 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19325 | | LysR family transcriptional regulator | strong | 33 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS12385 | | LysR family transcriptional regulator | insig. | 32 | 88 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS05215 | | LysR family transcriptional regulator | strong | 34 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31025 | | LysR family transcriptional regulator | insig. | 35 | 86 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22720 | | LysR family transcriptional regulator | sig. | 34 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS04655 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3928 | | Chromosome initiation inhibitor | sig. | 30 | 86 |
| | Pseudomonas putida KT2440 | PP_2539 | | Transcriptional regulator, LysR family | insig. | 33 | 83 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5691 | | Chromosome initiation inhibitor | no data | 30 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03221 | | DNA-binding transcriptional regulator, LysR family | insig. | 33 | 86 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23080 | | LysR family transcriptional regulator | insig. | 33 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS13480 | | LysR family transcriptional regulator | insig. | 35 | 83 |
| | Paraburkholderia graminis OAS925 | ABIE53_004070 | | DNA-binding transcriptional LysR family regulator | strong | 32 | 88 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26875 | | LysR family transcriptional regulator | insig. | 32 | 84 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_613 | | Galactose-binding protein regulator | strong | 32 | 81 |
| | Variovorax sp. OAS795 | ABID97_RS06825 | | LysR family transcriptional regulator | insig. | 32 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30410 | | LysR family transcriptional regulator | strong | 32 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02334 | | DNA-binding transcriptional regulator, LysR family | insig. | 31 | 87 |
| | Escherichia coli ECRC100 | OKFHMN_23585 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC101 | MCAODC_14635 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC102 | NIAGMN_21350 | lysR | transcriptional regulator | insig. | 32 | 87 |
| o | Escherichia coli ECRC62 | BNILDI_14075 | lysR | transcriptional regulator | cofit | 32 | 87 |
| | Escherichia coli ECRC98 | JDDGAC_27540 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC99 | KEDOAH_04600 | lysR | transcriptional regulator | no data | 32 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_000319 | | DNA-binding transcriptional LysR family regulator | sig. | 31 | 87 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS01515 | | LysR family transcriptional regulator | insig. | 35 | 78 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04085 | | LysR family transcriptional regulator | insig. | 32 | 87 |
| o | Pseudomonas segetis P6 | MPMX49_00417 | | HTH-type transcriptional regulator GbpR | insig. | 31 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_06223 | | HTH-type transcriptional regulator GbpR | insig. | 31 | 86 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31235 | | transcriptional regulator | insig. | 33 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS19705 | | LysR family transcriptional regulator | strong | 30 | 87 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3376 | | Transcriptional regulator, LysR family | insig. | 31 | 81 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10765 | | LysR family transcriptional regulator | insig. | 32 | 81 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3077.1 | | Galactose-binding protein regulator | insig. | 32 | 87 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3798 | | Putative transcriptional regulator | insig. | 33 | 84 |
| | Variovorax sp. SCN45 | GFF5271 | | Transcriptional regulator, LysR family | insig. | 31 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_001916 | | DNA-binding transcriptional LysR family regulator | sig. | 30 | 86 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS07795 | | LysR family transcriptional regulator | sig. | 33 | 81 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS00725 | | LysR family transcriptional regulator | strong | 33 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07230 | | LysR family transcriptional regulator | insig. | 29 | 84 |
| | Variovorax sp. OAS795 | ABID97_RS01380 | | LysR substrate-binding domain-containing protein | insig. | 35 | 77 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28500 | | LysR family transcriptional regulator | no data | 30 | 86 |
| | Pseudomonas putida KT2440 | PP_2649 | | Transcriptional regulator, LysR family | insig. | 30 | 90 |
| o | Klebsiella michiganensis M5al | BWI76_RS19595 | | hypothetical protein | insig. | 31 | 86 |
| | Pseudomonas segetis P6 | MPMX49_00425 | | HTH-type transcriptional regulator GbpR | insig. | 31 | 83 |
| o | Agrobacterium fabrum C58 | Atu2350 | | transcriptional regulator, LysR family | sig. | 32 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02950 | | DNA-binding transcriptional regulator, LysR family | insig. | 30 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS02790 | | LysR family transcriptional regulator | insig. | 29 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33725 | | LysR family transcriptional regulator | no data | 28 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30525 | | LysR family transcriptional regulator | strong | 32 | 76 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31295 | | LysR substrate-binding domain-containing protein | insig. | 31 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31320 | | LysR substrate-binding domain-containing protein | insig. | 30 | 92 |
| | Variovorax sp. SCN45 | GFF2033 | | no description | insig. | 30 | 80 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF270 | | Transcriptional regulator, LysR family | insig. | 30 | 91 |
| | Pseudomonas putida KT2440 | PP_2832 | | galactose-binding protein regulator | insig. | 29 | 85 |
| | Pseudomonas sp. BP01 | JOY50_RS05595 | | LysR family transcriptional regulator | insig. | 29 | 84 |
| | Variovorax sp. SCN45 | GFF750 | | Transcriptional regulator LigR, LysR family | insig. | 30 | 81 |
| o | Serratia liquefaciens MT49 | IAI46_05785 | | LysR family transcriptional regulator | insig. | 27 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_004026 | | LysR family transcriptional regulator of gallate degradation | insig. | 28 | 91 |
| | Variovorax sp. SCN45 | GFF2367 | | Transcriptional regulator, LysR family | cofit | 29 | 88 |
| o | Rhizobium sp. OAE497 | ABIE40_RS13945 | | LysR family transcriptional regulator | sig. | 29 | 84 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01375 | | LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway | sig. | 28 | 85 |
| | Paraburkholderia graminis OAS925 | ABIE53_004922 | | LysR family pca operon transcriptional activator | insig. | 26 | 91 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1529 | | Putative transcriptional regulator | insig. | 29 | 73 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26660 | | LysR family transcriptional regulator | insig. | 31 | 87 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33450 | | LysR family transcriptional regulator | insig. | 27 | 92 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS03730 | | LysR substrate-binding domain-containing protein | insig. | 33 | 71 |
| | Variovorax sp. SCN45 | GFF4149 | | hypothetical protein | insig. | 28 | 89 |
| | Rhizobium sp. OAE497 | ABIE40_RS26220 | | LysR family transcriptional regulator | insig. | 27 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS31720 | | LysR family transcriptional regulator | insig. | 29 | 78 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23035 | | sporulation protein | insig. | 29 | 82 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00565 | | pca operon transcription factor PcaQ | insig. | 28 | 91 |
| | Ralstonia solanacearum UW163 | UW163_RS13895 | | pca operon transcription factor PcaQ | insig. | 28 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS05115 | | LysR family transcriptional regulator | insig. | 29 | 80 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03866 | | transcriptional regulator, LysR family | cofit | 27 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS27845 | pcaQ | pca operon transcription factor PcaQ | insig. | 28 | 90 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c02580 | | putative HTH-type transcriptional regulator pcaQ | insig. | 28 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12125 | | LysR family transcriptional regulator | insig. | 29 | 70 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32130 | | LysR substrate-binding domain-containing protein | insig. | 28 | 85 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_24780 | | pca operon transcription factor PcaQ | insig. | 30 | 87 |
| | Serratia liquefaciens MT49 | IAI46_12810 | | LysR family transcriptional regulator | insig. | 29 | 89 |