| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1106 | | Chromosome initiation inhibitor | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_26165 | | LysR family transcriptional regulator | insig. | 98 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3928 | | Chromosome initiation inhibitor | sig. | 92 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5691 | | Chromosome initiation inhibitor | no data | 91 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS12385 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS28230 | | LysR family transcriptional regulator | no data | 47 | 97 |
| o | Paraburkholderia graminis OAS925 | ABIE53_005694 | | DNA-binding transcriptional LysR family regulator | strong | 46 | 97 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01226 | | transcriptional regulator, LysR family | no data | 46 | 97 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS12630 | | LysR family transcriptional regulator | strong | 45 | 98 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS26875 | | LysR family transcriptional regulator | insig. | 39 | 97 |
| | Xanthobacter sp. DMC5 | GFF2143 | | HTH-type transcriptional regulator GbpR | insig. | 36 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3376 | | Transcriptional regulator, LysR family | insig. | 36 | 91 |
| o | Variovorax sp. SCN45 | GFF5271 | | Transcriptional regulator, LysR family | insig. | 36 | 93 |
| | Pseudomonas putida KT2440 | PP_2833 | | Transcriptional regulator, LysR family | insig. | 34 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS17285 | | LysR family transcriptional regulator | strong | 37 | 85 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_10765 | | LysR family transcriptional regulator | sig. | 37 | 85 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS39525 | | LysR family transcriptional regulator | strong | 37 | 85 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31025 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS05600 | | LysR family transcriptional regulator | insig. | 34 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1666 | | Transcriptional regulator, LysR family | strong | 34 | 98 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS05215 | | LysR family transcriptional regulator | strong | 36 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19325 | | LysR family transcriptional regulator | strong | 35 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3526 | | Transcriptional regulator, LysR family | insig. | 34 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05435 | | DNA-binding transcriptional regulator, LysR family | sig. | 32 | 98 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28750 | | LysR family transcriptional regulator | no data | 34 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03221 | | DNA-binding transcriptional regulator, LysR family | insig. | 35 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_613 | | Galactose-binding protein regulator | strong | 36 | 90 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27455 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_004070 | | DNA-binding transcriptional LysR family regulator | strong | 35 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_861 | | Transcriptional regulator, LysR family | insig. | 30 | 97 |
| | Variovorax sp. SCN45 | GFF5191 | | Galactose-binding protein regulator | insig. | 36 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23080 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| o | Variovorax sp. OAS795 | ABID97_RS06825 | | LysR family transcriptional regulator | insig. | 36 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06875 | | LysR family transcriptional regulator | strong | 34 | 97 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04085 | | LysR family transcriptional regulator | insig. | 35 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28500 | | LysR family transcriptional regulator | no data | 34 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22720 | | LysR family transcriptional regulator | sig. | 33 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02950 | | DNA-binding transcriptional regulator, LysR family | insig. | 34 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_001916 | | DNA-binding transcriptional LysR family regulator | sig. | 31 | 99 |
| o | Pseudomonas segetis P6 | ACVTMO_RS02095 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33955 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS01515 | | LysR family transcriptional regulator | insig. | 33 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS04655 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS00725 | | LysR family transcriptional regulator | strong | 34 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02334 | | DNA-binding transcriptional regulator, LysR family | insig. | 32 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30410 | | LysR family transcriptional regulator | strong | 34 | 92 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS31235 | | transcriptional regulator | insig. | 34 | 92 |
| | Pseudomonas putida KT2440 | PP_2832 | | galactose-binding protein regulator | insig. | 32 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_06223 | | HTH-type transcriptional regulator GbpR | insig. | 32 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS13480 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS07795 | | LysR family transcriptional regulator | sig. | 32 | 99 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3077.1 | | Galactose-binding protein regulator | insig. | 35 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS05595 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_000319 | | DNA-binding transcriptional LysR family regulator | sig. | 32 | 99 |
| | Variovorax sp. OAS795 | ABID97_RS09990 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| | Variovorax sp. SCN45 | GFF2367 | | Transcriptional regulator, LysR family | cofit | 30 | 100 |
| | Pseudomonas putida KT2440 | PP_2539 | | Transcriptional regulator, LysR family | insig. | 32 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS19705 | | LysR family transcriptional regulator | strong | 31 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS02790 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Pseudomonas putida KT2440 | PP_2649 | | Transcriptional regulator, LysR family | insig. | 30 | 99 |
| | Variovorax sp. SCN45 | GFF4149 | | hypothetical protein | insig. | 33 | 95 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1529 | | Putative transcriptional regulator | insig. | 34 | 91 |
| o | Rhizobium sp. OAE497 | ABIE40_RS26220 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF270 | | Transcriptional regulator, LysR family | insig. | 34 | 93 |
| | Escherichia coli ECRC100 | OKFHMN_23585 | lysR | transcriptional regulator | insig. | 30 | 95 |
| | Escherichia coli ECRC101 | MCAODC_14635 | lysR | transcriptional regulator | insig. | 30 | 95 |
| | Escherichia coli ECRC102 | NIAGMN_21350 | lysR | transcriptional regulator | insig. | 30 | 95 |
| | Escherichia coli ECRC98 | JDDGAC_27540 | lysR | transcriptional regulator | insig. | 30 | 95 |
| | Escherichia coli ECRC99 | KEDOAH_04600 | lysR | transcriptional regulator | no data | 30 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26660 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32070 | | LysR family transcriptional regulator | cofit | 30 | 98 |
| | Escherichia coli ECRC62 | BNILDI_14075 | lysR | transcriptional regulator | cofit | 30 | 95 |
| | Pseudomonas segetis P6 | ACVTMO_RS02055 | | LysR family transcriptional regulator | insig. | 30 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_004922 | | LysR family pca operon transcriptional activator | insig. | 31 | 98 |
| o | Ralstonia solanacearum GMI1000 | RS_RS07250 | | pca operon transcription factor PcaQ | insig. | 31 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33450 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Variovorax sp. SCN45 | GFF2033 | | no description | insig. | 32 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30525 | | LysR family transcriptional regulator | strong | 31 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31295 | | LysR substrate-binding domain-containing protein | insig. | 31 | 81 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS12080 | | pca operon transcription factor PcaQ | strong | 29 | 97 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS16935 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS03730 | | LysR substrate-binding domain-containing protein | insig. | 31 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS13945 | | LysR family transcriptional regulator | sig. | 26 | 97 |
| | Variovorax sp. SCN45 | GFF4669 | | Pca operon transcriptional activator PcaQ | no data | 30 | 92 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_23225 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2615 | | LysR family transcriptional regulator YdcI | insig. | 28 | 96 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3798 | | Putative transcriptional regulator | insig. | 31 | 95 |
| o | Escherichia fergusonii Becca | EFB2_02558 | | HTH-type transcriptional regulator CatM | insig. | 27 | 97 |
| | Escherichia coli ECRC100 | OKFHMN_01655 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | cofit | 27 | 97 |
| | Escherichia coli ECRC101 | MCAODC_16280 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 27 | 97 |
| | Escherichia coli ECRC102 | NIAGMN_25790 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 27 | 97 |
| | Escherichia coli ECRC98 | JDDGAC_04145 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 27 | 97 |
| | Escherichia coli ECRC99 | KEDOAH_26785 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | no data | 27 | 97 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS08220 | | LysR substrate-binding domain-containing protein | insig. | 27 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03866 | | transcriptional regulator, LysR family | cofit | 28 | 98 |
| o | Escherichia coli ECOR27 | NOLOHH_19335 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | sig. | 27 | 97 |
| o | Escherichia coli ECOR38 | HEPCGN_26160 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | sig. | 27 | 97 |
| o | Klebsiella michiganensis M5al | BWI76_RS13280 | | LysR family transcriptional regulator | strong | 29 | 92 |
| | Escherichia coli ECRC62 | BNILDI_17790 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | cofit | 27 | 97 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02293 | | HTH-type transcriptional regulator CatM | insig. | 27 | 97 |