Homologs of PP_4979 from Pseudomonas putida KT2440

putative Periplasmic binding protein
SEED: periplasmic binding protein, putative
KEGG: polar amino acid transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4979 putative Periplasmic binding protein sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS09800 ABC transporter substrate-binding protein insig. 81 100
o Pseudomonas sp. SVBP6 COO64_RS17475 ABC transporter substrate-binding protein insig. 64 99
o Pseudomonas orientalis W4I3 QF045_RS00915 transporter substrate-binding domain-containing protein cofit 57 99
o Pseudomonas sp. RS175 PFR28_04203 putative amino-acid-binding protein YxeM cofit 59 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05435 hypothetical protein insig. 56 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1049 periplasmic binding protein, putative insig. 53 98
o Pseudomonas simiae WCS417 PS417_26520 amino acid ABC transporter substrate-binding protein sig. 56 99
o Pseudomonas fluorescens FW300-N2E3 AO353_08025 amino acid ABC transporter substrate-binding protein strong 57 99
o Pseudomonas fluorescens SBW25 PFLU_RS28175 transporter substrate-binding domain-containing protein insig. 56 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28175 transporter substrate-binding domain-containing protein insig. 56 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2383 periplasmic binding protein, putative insig. 56 92
o Pseudomonas fluorescens FW300-N2C3 AO356_13595 amino acid ABC transporter substrate-binding protein strong 57 99
o Pseudomonas sp. DMC3 GFF173 hypothetical protein cofit 53 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4636 periplasmic binding protein, putative strong 59 85
o Pseudomonas sp. S08-1 OH686_10830 ABC-type amino acid transport/signal transduction system, periplasmic component/domain insig. 54 85
  Pseudomonas sp. BP01 JOY50_RS08130 ABC transporter substrate-binding protein insig. 34 77
  Pseudomonas sp. SVBP6 COO64_RS21030 ABC transporter substrate-binding protein insig. 31 97
  Pseudomonas putida KT2440 PP_3729 Periplasmic amino acid-binding protein-related protein sig. 34 76
  Desulfovibrio vulgaris Miyazaki F DvMF_0387 extracellular solute-binding protein family 3 (RefSeq) insig. 28 76
  Pseudomonas fluorescens FW300-N2E3 AO353_24815 amino acid ABC transporter substrate-binding protein insig. 34 75
  Pseudomonas sp. S08-1 OH686_06535 hypothetical protein insig. 34 79
o Marinobacter adhaerens HP15 HP15_2907 extracellular solute-binding protein, family 3 insig. 30 81
o Shewanella oneidensis MR-1 SO0056 transporter, putative (NCBI ptt file) insig. 28 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_19005 amino acid ABC transporter substrate-binding protein insig. 29 90
  Pseudomonas sp. S08-1 OH686_07760 hypothetical protein cofit 28 84
  Vibrio cholerae E7946 ATCC 55056 CSW01_08015 ABC transporter substrate-binding protein insig. 29 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3213 FIG00956444: hypothetical protein insig. 34 65
  Azospirillum sp. SherDot2 MPMX19_04955 hypothetical protein insig. 24 85
  Shewanella sp. ANA-3 Shewana3_1085 hypothetical protein (RefSeq) cofit 26 92
  Desulfovibrio vulgaris Miyazaki F DvMF_3146 extracellular solute-binding protein family 3 (RefSeq) insig. 30 80
  Desulfovibrio vulgaris Hildenborough JW710 DVU2409 bacterial extracellular solute-binding proteins, family 3 (TIGR) insig. 28 81
  Azospirillum sp. SherDot2 MPMX19_03365 hypothetical protein insig. 27 74
  Pseudomonas aeruginosa MRSN321 DY961_RS10710 transporter substrate-binding domain-containing protein sig. 34 63
  Pseudomonas aeruginosa PUPa3 DQ20_RS51350 transporter substrate-binding domain-containing protein strong 34 63
  Desulfovibrio vulgaris Hildenborough JW710 DVU3139 bacterial extracellular solute-binding protein, family 3 (TIGR) insig. 24 89
  Pseudomonas aeruginosa PA14 IKLFDK_28625 amino acid ABC transporter substrate-binding protein sig. 33 63
  Desulfovibrio vulgaris Hildenborough JW710 DVU0852 extracellular solute-binding protein, putative (TIGR) insig. 27 84
  Pseudomonas sp. S08-1 OH686_17870 hypothetical protein insig. 28 94
  Acidovorax sp. GW101-3H11 Ac3H11_4153 periplasmic binding protein, putative insig. 31 62
  Pseudomonas aeruginosa PA14 IKLFDK_20765 protein kinase insig. 30 62
  Pseudomonas aeruginosa MRSN321 DY961_RS27600 transporter substrate-binding domain-containing protein insig. 30 62
  Pseudomonas aeruginosa PUPa3 DQ20_RS48045 transporter substrate-binding domain-containing protein insig. 30 62
o Pseudomonas segetis P6 ACVTMO_RS05675 substrate-binding periplasmic protein insig. 26 89
  Pseudomonas sp. S08-1 OH686_20015 hypothetical protein insig. 28 62
  Azospirillum brasilense Sp245 AZOBR_RS18240 hypothetical protein insig. 26 74
  Pseudomonas fluorescens SBW25 PFLU_RS28035 transporter substrate-binding domain-containing protein cofit 25 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28035 transporter substrate-binding domain-containing protein sig. 25 92
  Pseudomonas sp. RS175 PFR28_04175 hypothetical protein insig. 25 90
  Desulfovibrio vulgaris Miyazaki F DvMF_0051 extracellular solute-binding protein family 3 (RefSeq) insig. 28 71
  Herbaspirillum seropedicae SmR1 HSERO_RS17700 amino acid-binding protein insig. 30 89
  Marinobacter adhaerens HP15 HP15_4046 extracellular solute-binding protein, family 3 insig. 28 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2409 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain insig. 24 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_17145 ABC transporter substrate-binding protein no data 27 92
  Pseudomonas fluorescens FW300-N2C3 AO356_13745 amino acid ABC transporter substrate-binding protein insig. 26 90
  Pseudomonas simiae WCS417 PS417_26385 amino acid ABC transporter substrate-binding protein insig. 23 92
  Pseudomonas aeruginosa MRSN321 DY961_RS08615 ABC transporter substrate-binding protein insig. 28 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU2662 conserved hypothetical protein (TIGR) insig. 30 68
  Shewanella amazonensis SB2B Sama_1011 hypothetical protein (RefSeq) insig. 28 82
  Pseudomonas aeruginosa PA14 IKLFDK_03340 ABC transporter substrate-binding protein insig. 27 90
  Pseudomonas sp. S08-1 OH686_08790 ABC-type amino acid transport/signal transduction system, periplasmic component/domain insig. 28 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS44235 ABC transporter substrate-binding protein insig. 27 90
  Shewanella oneidensis MR-1 SO3481 conserved hypothetical protein (NCBI ptt file) insig. 27 65
  Pseudomonas sp. S08-1 OH686_07245 ABC-type amino acid transport/signal transduction system, periplasmic component/domain insig. 27 75
  Marinobacter adhaerens HP15 HP15_3113 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein insig. 24 89
  Pseudomonas segetis P6 ACVTMO_RS07335 substrate-binding periplasmic protein insig. 26 89
  Shewanella sp. ANA-3 Shewana3_1074 extracellular solute-binding protein (RefSeq) cofit 27 68
  Shewanella oneidensis MR-1 SO1503 ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) insig. 24 86
  Pseudomonas sp. S08-1 OH686_10705 hypothetical protein insig. 31 70
o Shewanella loihica PV-4 Shew_2779 amino acid ABC transporter (RefSeq) insig. 24 88
  Shewanella loihica PV-4 Shew_3070 extracellular solute-binding protein (RefSeq) insig. 26 61
  Desulfovibrio vulgaris Miyazaki F DvMF_1176 extracellular solute-binding protein family 3 (RefSeq) insig. 32 45
  Azospirillum brasilense Sp245 AZOBR_RS04520 hypothetical protein insig. 26 76
  Pseudomonas sp. S08-1 OH686_05405 ABC-type amino acid transport/signal transduction system, periplasmic component/domain insig. 30 69
  Pseudomonas fluorescens FW300-N2E3 AO353_07865 amino acid ABC transporter substrate-binding protein insig. 26 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4670 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain sig. 25 90
  Pseudomonas sp. S08-1 OH686_05760 hypothetical protein insig. 28 84
  Shewanella amazonensis SB2B Sama_0526 hypothetical protein (RefSeq) insig. 25 84
  Marinobacter adhaerens HP15 HP15_1387 ABC-type amino acid transport/signal transduction system, periplasmic domain protein sig. 28 84
  Pseudomonas sp. RS175 PFR28_02341 hypothetical protein insig. 26 82
  Pseudomonas orientalis W4I3 QF045_RS00770 transporter substrate-binding domain-containing protein insig. 24 91
  Pseudomonas aeruginosa MRSN321 DY961_RS12230 ABC transporter substrate-binding protein strong 26 89
  Pseudomonas aeruginosa PA14 IKLFDK_27100 ABC transporter permease sig. 26 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS49890 ABC transporter substrate-binding protein strong 26 89
  Shewanella sp. ANA-3 Shewana3_2926 extracellular solute-binding protein (RefSeq) insig. 23 89
  Pseudomonas syringae pv. syringae B728a Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family insig. 22 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family insig. 22 90
  Pseudomonas putida KT2440 PP_3624 conserved exported protein of unknown function insig. 26 76
  Pseudomonas segetis P6 ACVTMO_RS22465 substrate-binding periplasmic protein insig. 24 78
  Shewanella oneidensis MR-1 SO1260 hypothetical amino acid ABC transporter (NCBI ptt file) strong 25 79
  Pseudomonas sp. SVBP6 COO64_RS17605 ABC transporter substrate-binding protein insig. 23 84
  Pseudomonas segetis P6 ACVTMO_RS07105 substrate-binding periplasmic protein sig. 29 64
  Desulfovibrio vulgaris Hildenborough JW710 DVU0089 conserved hypothetical protein (TIGR) insig. 28 57
  Desulfovibrio vulgaris Miyazaki F DvMF_0301 extracellular solute-binding protein family 3 (RefSeq) insig. 30 61
  Shewanella amazonensis SB2B Sama_1574 ABC transporter (RefSeq) insig. 26 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1616 hypothetical protein insig. 24 90
  Desulfovibrio vulgaris Miyazaki F DvMF_0388 hypothetical protein (RefSeq) insig. 32 72
  Pseudomonas fluorescens FW300-N2C3 AO356_23365 amino acid ABC transporter substrate-binding protein insig. 25 85
  Shewanella amazonensis SB2B Sama_1008 amino acid ABC transporter (RefSeq) insig. 23 90
  Azospirillum sp. SherDot2 MPMX19_04714 L-cystine-binding protein FliY insig. 26 69