Homologs of GFF5326 from Sphingobium sp. HT1-2

Phage integrase, site-specific serine recombinase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF5326 Phage integrase, site-specific serine recombinase cofit 100 100
  Sphingobium sp. HT1-2 GFF4321 Phage integrase, site-specific serine recombinase cofit 73 93
o Variovorax sp. SCN45 GFF7081 Mobile element protein no data 57 95
o Rhodospirillum rubrum S1H Rru_B0010 Resolvase (NCBI) insig. 55 93
  Shewanella oneidensis MR-1 SOA0019 ISSod9, DNA-invertase (NCBI ptt file) no data 56 93
o Shewanella oneidensis MR-1 SOA0170 ISSod9, DNA-invertase (NCBI ptt file) no data 56 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3230.1 Phage DNA invertase insig. 56 91
o Klebsiella michiganensis M5al BWI76_RS12375 DNA-invertase hin sig. 53 93
  Sphingobium sp. HT1-2 GFF5292 Phage DNA invertase cofit 54 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16275 recombinase family protein insig. 54 91
  Escherichia coli BW25113 b1158 pin e14 prophage; site-specific DNA recombinase (NCBI) sig. 51 95
o Enterobacter asburiae PDN3 EX28DRAFT_3112 Site-specific recombinases, DNA invertase Pin homologs insig. 50 93
  Escherichia coli ECRC100 OKFHMN_09410 pinE site-specific DNA recombinase cofit 50 95
  Escherichia coli ECRC101 MCAODC_00110 pinE site-specific DNA recombinase insig. 50 95
  Escherichia coli ECRC102 NIAGMN_07460 pinE site-specific DNA recombinase insig. 50 95
  Escherichia coli ECRC98 JDDGAC_13045 pinE site-specific DNA recombinase insig. 50 95
  Escherichia coli ECRC98 JDDGAC_09160 spoIVCA DNA-invertase strong 50 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20365 recombinase family protein cofit 49 93
o Escherichia fergusonii Becca EFB2_03222 DNA-invertase hin insig. 51 93
o Escherichia coli ECOR38 HEPCGN_26710 spoIVCA DNA-invertase insig. 50 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1543 DNA-invertase insig. 49 92
  Pseudomonas stutzeri RCH2 Psest_4043 Site-specific recombinases, DNA invertase Pin homologs insig. 57 92
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_19155 DNA-invertase no data 49 94
  Escherichia coli ECRC101 MCAODC_20820 spoIVCA DNA-invertase insig. 49 93
  Magnetospirillum magneticum AMB-1 AMB_RS16710 recombinase family protein insig. 53 91
  Magnetospirillum magneticum AMB-1 AMB_RS15985 recombinase family protein cofit 54 91
  Escherichia coli ECOR38 HEPCGN_24370 DNA invertase insig. 49 93
  Escherichia coli ECOR38 HEPCGN_04245 DNA-invertase insig. 46 96
  Variovorax sp. SCN45 GFF7128 Mobile element protein no data 56 77
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25760 Recombinase family protein cofit 45 95
  Erwinia tracheiphila SCR3 LU632_RS10670 recombinase family protein sig. 45 95
  Azospirillum brasilense Sp245 AZOBR_RS32770 invertase no data 53 95
o Dickeya dianthicola 67-19 HGI48_RS12185 recombinase family protein insig. 52 93
o Dickeya dadantii 3937 DDA3937_RS12095 recombinase family protein insig. 52 93
  Escherichia coli ECRC98 JDDGAC_05745 spoIVCA Hin recombinase insig. 50 95
o Dickeya dianthicola ME23 DZA65_RS12635 recombinase family protein insig. 52 95
  Klebsiella pneumoniae MKP103 KDGMDA_19850 DNA-invertase sig. 53 76
  Erwinia tracheiphila SCR3 LU632_RS25210 recombinase family protein insig. 44 93
  Shewanella loihica PV-4 Shew_3862 resolvase domain-containing protein (RefSeq) insig. 48 91
o Escherichia coli ECRC62 BNILDI_21055 DNA-invertase cofit 42 93
  Pseudomonas syringae pv. syringae B728a Psyr_2668 Helix-turn-helix, Fis-type insig. 47 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2668 Helix-turn-helix, Fis-type insig. 47 95
  Cupriavidus basilensis FW507-4G11 RR42_RS00040 recombinase insig. 49 92
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_04810 recombinase family protein no data 45 90
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_09975 recombinase family protein no data 45 90
  Dinoroseobacter shibae DFL-12 Dshi_3683 Resolvase domain (RefSeq) insig. 48 92
  Sphingobium sp. HT1-2 GFF4499 hypothetical protein cofit 43 95
  Dinoroseobacter shibae DFL-12 Dshi_4084 Resolvase domain (RefSeq) insig. 43 91
  Azospirillum brasilense Sp245 AZOBR_RS20835 DNA resolvase no data 50 92
  Pseudomonas segetis P6 ACVTMO_RS00950 recombinase family protein insig. 43 92
  Methanococcus maripaludis S2 MMP_RS03990 recombinase family protein insig. 43 92
  Dechlorosoma suillum PS Dsui_2492 site-specific recombinase, DNA invertase Pin insig. 43 92
  Dechlorosoma suillum PS Dsui_2526 site-specific recombinase, DNA invertase Pin insig. 43 92
  Azospirillum brasilense Sp245 AZOBR_RS27370 resolvase no data 43 92
  Paraburkholderia graminis OAS925 ABIE53_000503 DNA invertase Pin-like site-specific DNA recombinase sig. 47 80
  Dechlorosoma suillum PS Dsui_2500 site-specific recombinase, DNA invertase Pin cofit 46 95
  Sphingobium sp. HT1-2 GFF5199 hypothetical protein cofit 43 93
  Azospirillum sp. SherDot2 MPMX19_06437 DNA-invertase hin insig. 43 92
  Methanococcus maripaludis JJ MMJJ_RS02615 recombinase family protein no data 41 92
  Shewanella loihica PV-4 Shew_0991 resolvase domain-containing protein (RefSeq) no data 44 95
o Escherichia coli ECOR27 NOLOHH_00080 Resolvase/invertase-type recombinase catalytic domain-containing protein insig. 43 92
  Sinorhizobium meliloti 1021 SMc02287 DNA-invertase insig. 42 88
  Paraburkholderia graminis OAS925 ABIE53_000504 DNA invertase Pin-like site-specific DNA recombinase sig. 44 96
  Pseudomonas putida KT2440 PP_5490 site-specific DNA recombinase insig. 42 93
  Pseudomonas stutzeri RCH2 Psest_4383 Site-specific recombinases, DNA invertase Pin homologs sig. 43 91
  Sphingobium sp. HT1-2 GFF5286 hypothetical protein cofit 43 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0960 Site-specific recombinases, DNA invertase Pin homologs insig. 41 91
  Sphingobium sp. HT1-2 GFF5191 Resolvase/Integrase TinR protein insig. 46 92
  Dinoroseobacter shibae DFL-12 Dshi_4026 Resolvase domain (RefSeq) insig. 46 74
  Dinoroseobacter shibae DFL-12 Dshi_4105 Resolvase domain (RefSeq) insig. 47 74
  Dickeya dianthicola 67-19 HGI48_RS15525 recombinase family protein insig. 41 91
  Dinoroseobacter shibae DFL-12 Dshi_3853 Resolvase domain (RefSeq) insig. 48 71
  Variovorax sp. OAS795 ABID97_RS17765 recombinase family protein insig. 42 88
  Azospirillum sp. SherDot2 MPMX19_05448 DNA-invertase hin insig. 41 91
  Enterobacter sp. TBS_079 MPMX20_04745 Transposon Tn3 resolvase insig. 40 95
  Dickeya dianthicola ME23 DZA65_RS16340 recombinase family protein insig. 41 91
  Shewanella oneidensis MR-1 SOA0086 site-specific recombinase, resolvase family (NCBI ptt file) insig. 37 92
  Dinoroseobacter shibae DFL-12 Dshi_3748 Resolvase domain (RefSeq) insig. 47 71
  Dinoroseobacter shibae DFL-12 Dshi_3680 Resolvase domain (RefSeq) no data 40 97
  Dinoroseobacter shibae DFL-12 Dshi_3876 Resolvase domain (RefSeq) no data 40 97
  Dinoroseobacter shibae DFL-12 Dshi_4081 Resolvase domain (RefSeq) no data 40 97
  Azospirillum sp. SherDot2 MPMX19_01561 DNA-invertase hin insig. 41 93
  Azospirillum sp. SherDot2 MPMX19_06322 hypothetical protein insig. 50 62
  Sphingobium sp. HT1-2 GFF5317 hypothetical protein cofit 40 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22005 recombinase family protein cofit 38 95
  Azospirillum sp. SherDot2 MPMX19_06438 DNA-invertase hin insig. 40 91
  Synechocystis sp000284455 PCC 6803 SGL_RS00860 recombinase family protein insig. 40 92
  Sphingobium sp. HT1-2 GFF4727 DNA-invertase cofit 44 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04373 Transposon Tn3 resolvase insig. 41 92
  Klebsiella pneumoniae MKP103 KDGMDA_00030 Transposon Tn1331 resolvase no data 41 92
  Klebsiella pneumoniae MKP103 KDGMDA_02085 Transposon Tn1331 resolvase no data 41 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12400 DUF1492 domain-containing protein insig. 38 91
  Pseudomonas aeruginosa PA14 IKLFDK_19920 recombinase family protein insig. 43 66
  Azospirillum sp. SherDot2 MPMX19_01313 DNA-invertase hin insig. 41 93
  Azospirillum sp. SherDot2 MPMX19_06678 hypothetical protein no data 42 78
  Azospirillum sp. SherDot2 MPMX19_06460 DNA-invertase hin insig. 39 92
  Pseudomonas orientalis W4I3 QF045_RS23030 recombinase family protein insig. 41 91
  Azospirillum brasilense Sp245 AZOBR_RS30300 resolvase insig. 38 91
  Azospirillum brasilense Sp245 AZOBR_RS32940 DNA invertase no data 42 78
  Synechocystis sp000284455 PCC 6803 SGL_RS01270 recombinase family protein insig. 34 92