| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF4170 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 100 | 100 |
| | Variovorax sp. SCN45 | GFF155 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 56 | 96 |
| | Pseudomonas simiae WCS417 | PS417_11130 | | peptide ABC transporter substrate-binding protein | insig. | 48 | 100 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25855 | | peptide ABC transporter substrate-binding protein | insig. | 48 | 99 |
| | Agrobacterium fabrum C58 | Atu3375 | | peptide ABC transporter substrate-binding protein | insig. | 46 | 96 |
| | Variovorax sp. SCN45 | GFF916 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 48 | 96 |
| | Sinorhizobium meliloti 1021 | SMc02025 | | dipeptide-binding periplasmic protein | insig. | 47 | 95 |
| | Rahnella sp. WP5 | EX31_RS09180 | | ABC transporter substrate-binding protein | insig. | 29 | 97 |
| | Rahnella sp. WP5 | EX31_RS17540 | | ABC transporter substrate-binding protein | insig. | 27 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25295 | | ABC transporter substrate-binding protein | insig. | 27 | 89 |
| | Bosea sp. OAE506 | ABIE41_RS21960 | | ABC transporter substrate-binding protein | insig. | 28 | 86 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23915 | | ABC transporter substrate-binding protein | insig. | 28 | 93 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_698 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein | insig. | 26 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3310 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 28 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27430 | | peptide ABC transporter substrate-binding protein | insig. | 27 | 86 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS21350 | | peptide ABC transporter substrate-binding protein | insig. | 27 | 93 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5054 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | strong | 28 | 87 |
| | Pseudomonas orientalis W4I3 | QF045_RS07060 | | ABC transporter substrate-binding protein | insig. | 29 | 86 |
| | Pseudomonas simiae WCS417 | PS417_04065 | | peptide ABC transporter substrate-binding protein | sig. | 29 | 86 |
| | Pseudomonas sp. DMC3 | GFF5023 | | Periplasmic dipeptide transport protein | cofit | 28 | 87 |
| | Enterobacter sp. TBS_079 | MPMX20_00905 | | Glutathione-binding protein GsiB | insig. | 28 | 97 |
| | Xanthobacter sp. DMC5 | GFF797 | | Periplasmic dipeptide transport protein | insig. | 27 | 91 |
| | Pseudomonas sp. RS175 | PFR28_00128 | | Periplasmic dipeptide transport protein | insig. | 27 | 88 |
| | Pseudomonas sp. SVBP6 | COO64_RS04105 | | ABC transporter substrate-binding protein | insig. | 29 | 83 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS04105 | | ABC transporter substrate-binding protein | insig. | 29 | 86 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04105 | | ABC transporter substrate-binding protein | insig. | 29 | 86 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01017 | | Periplasmic dipeptide transport protein | cofit | 29 | 86 |
| | Rhizobium sp. OAE497 | ABIE40_RS20685 | | ABC transporter substrate-binding protein | insig. | 28 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_006348 | | peptide/nickel transport system substrate-binding protein | insig. | 28 | 89 |
| | Fusobacterium nucleatum SB010 | HUW76_03515 | | glutathione ABC transporter substrate-binding protein | strong | 28 | 89 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_07255 | | peptide ABC transporter substrate-binding protein | strong | 27 | 87 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2673 | | ABC-type dipeptide transport system, periplasmic component | insig. | 27 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_02755 | | Periplasmic dipeptide transport protein | insig. | 30 | 72 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23960 | | ABC transporter substrate-binding protein | insig. | 29 | 83 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01570 | | Di/tripeptide-binding protein 4 | insig. | 29 | 83 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56425 | | ABC transporter substrate-binding protein | insig. | 29 | 83 |
| | Fusobacterium nucleatum SB010 | HUW76_05125 | | ABC transporter substrate-binding protein | cofit | 29 | 84 |
| | Agrobacterium fabrum C58 | Atu3269 | | dipeptide ABC transporter substrate-binding protein | insig. | 26 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS02325 | | ABC transporter substrate-binding protein | sig. | 30 | 72 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS11110 | | ABC transporter substrate-binding protein | insig. | 28 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS02550 | | ABC transporter substrate-binding protein | insig. | 27 | 86 |
| | Pseudomonas putida KT2440 | PP_0882 | | dipeptide ABC transporter - periplasmic binding protein | insig. | 28 | 84 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23015 | | peptide ABC transporter substrate-binding protein | insig. | 26 | 85 |
| | Pectobacterium carotovorum WPP14 | HER17_RS16445 | | ABC transporter substrate-binding protein | cofit | 26 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01030 | | peptide/nickel transport system substrate-binding protein | insig. | 28 | 94 |
| | Variovorax sp. SCN45 | GFF2339 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 27 | 83 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1123 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | cofit | 28 | 84 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17235 | | glutathione ABC transporter substrate-binding protein GsiB | insig. | 26 | 93 |
| | Bosea sp. OAE506 | ABIE41_RS18420 | | ABC transporter substrate-binding protein | insig. | 27 | 84 |
| | Pseudomonas segetis P6 | ACVTMO_RS19255 | | ABC transporter substrate-binding protein | insig. | 27 | 81 |
| | Variovorax sp. OAS795 | ABID97_RS23800 | | ABC transporter substrate-binding protein | cofit | 27 | 83 |
| | Bosea sp. OAE506 | ABIE41_RS10595 | | ABC transporter substrate-binding protein | insig. | 26 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_006399 | | peptide/nickel transport system substrate-binding protein | insig. | 26 | 97 |
| | Agrobacterium fabrum C58 | Atu4719 | | dipeptide ABC transporter substrate-binding protein | insig. | 27 | 88 |
| | Rahnella sp. WP5 | EX31_RS02025 | | ABC transporter substrate-binding protein | insig. | 26 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS00935 | | ABC transporter substrate-binding protein | strong | 28 | 85 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05390 | | peptide ABC transporter substrate-binding protein | strong | 27 | 87 |
| | Xanthobacter sp. DMC5 | GFF3420 | | Oligopeptide-binding protein AppA | insig. | 27 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS10965 | | ABC transporter substrate-binding protein | insig. | 29 | 84 |
| | Pseudomonas segetis P6 | ACVTMO_RS00100 | | ABC transporter substrate-binding protein | insig. | 28 | 79 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0223 | | extracellular solute-binding protein, family 5 | insig. | 28 | 79 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0223 | | extracellular solute-binding protein, family 5 | cofit | 28 | 79 |
| | Xanthobacter sp. DMC5 | GFF793 | | Oligopeptide-binding protein AppA | insig. | 26 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31485 | | ABC transporter substrate-binding protein | insig. | 28 | 89 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4378 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | sig. | 27 | 78 |
| | Rhodopseudomonas palustris CGA009 | TX73_012035 | | ABC transporter substrate-binding protein | cofit | 26 | 85 |
| | Variovorax sp. OAS795 | ABID97_RS22890 | | ABC transporter substrate-binding protein | insig. | 24 | 99 |
| | Sinorhizobium meliloti 1021 | SMc04037 | | peptide ABC transporter | insig. | 27 | 90 |
| | Variovorax sp. SCN45 | GFF6708 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 25 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_006403 | | peptide/nickel transport system substrate-binding protein | insig. | 25 | 87 |
| | Bosea sp. OAE506 | ABIE41_RS05905 | | ABC transporter substrate-binding protein | insig. | 26 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS06920 | | glutathione ABC transporter substrate-binding protein GsiB | insig. | 26 | 95 |
| | Pseudomonas simiae WCS417 | PS417_27765 | | peptide ABC transporter substrate-binding protein | sig. | 27 | 79 |
| | Dickeya dianthicola ME23 | DZA65_RS12365 | | ABC transporter substrate-binding protein | insig. | 24 | 94 |
| | Agrobacterium fabrum C58 | Atu3433 | | oligopeptide ABC transporter substrate-binding protein | insig. | 25 | 86 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02399 | | putative D,D-dipeptide-binding periplasmic protein DdpA | cofit | 23 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00020 | | Periplasmic dipeptide transport protein | insig. | 27 | 79 |
| | Pseudomonas sp. RS175 | PFR28_00132 | | Periplasmic dipeptide transport protein | insig. | 25 | 95 |
| | Xanthobacter sp. DMC5 | GFF803 | | Periplasmic dipeptide transport protein | insig. | 27 | 90 |
| | Rahnella sp. WP5 | EX31_RS10240 | | ABC transporter substrate-binding protein | insig. | 26 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2678 | | extracellular solute-binding protein, family 5 | insig. | 27 | 85 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2678 | | extracellular solute-binding protein, family 5 | insig. | 27 | 85 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS29440 | | ABC transporter substrate-binding protein | insig. | 27 | 79 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29440 | | ABC transporter substrate-binding protein | insig. | 27 | 79 |
| | Escherichia coli ECOR38 | HEPCGN_26475 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | insig. | 25 | 96 |
| | Sinorhizobium meliloti 1021 | SM_b20476 | | peptide ABC transporter substrate-binding protein | insig. | 25 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_03404 | | Glutathione-binding protein GsiB | insig. | 25 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS24120 | | ABC transporter substrate-binding protein | insig. | 26 | 95 |
| | Escherichia coli ECRC100 | OKFHMN_01320 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | cofit | 25 | 96 |
| | Escherichia coli ECRC101 | MCAODC_16620 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | insig. | 25 | 96 |
| | Escherichia coli ECRC102 | NIAGMN_25450 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | insig. | 25 | 96 |
| | Escherichia coli ECRC98 | JDDGAC_03810 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | insig. | 25 | 96 |
| | Escherichia coli ECRC99 | KEDOAH_27125 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | no data | 25 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_04022 | | hypothetical protein | insig. | 24 | 93 |
| | Pseudomonas sp. SVBP6 | COO64_RS25240 | | ABC transporter substrate-binding protein | insig. | 27 | 85 |
| | Variovorax sp. SCN45 | GFF4131 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 27 | 86 |
| | Escherichia coli ECOR27 | NOLOHH_18960 | ddpA | putative D,D-dipeptide-binding periplasmic protein DdpA | insig. | 25 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4823 | | Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein | strong | 28 | 72 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05370 | | peptide ABC transporter substrate-binding protein | insig. | 27 | 93 |
| | Variovorax sp. SCN45 | GFF4129 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | insig. | 26 | 86 |