| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Klebsiella michiganensis M5al | BWI76_RS07935 | | LysR family transcriptional regulator | sig. | 100 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_01270 | | putative HTH-type transcriptional regulator YbdO | cofit | 56 | 97 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4511 | | LysR-family transcriptional regulator YbeF | no data | 54 | 99 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2351 | | Transcriptional regulator | insig. | 54 | 97 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_16290 | | LysR family transcriptional regulator | insig. | 56 | 92 |
| o | Escherichia coli ECOR27 | NOLOHH_23895 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | no data | 52 | 97 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03102 | | putative HTH-type transcriptional regulator YbdO | insig. | 52 | 97 |
| o | Escherichia coli BW25113 | b0603 | ybdO | predicted DNA-binding transcriptional regulator (NCBI) | cofit | 52 | 97 |
| o | Escherichia coli ECRC62 | BNILDI_21905 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | insig. | 51 | 97 |
| o | Escherichia coli ECRC100 | OKFHMN_07520 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | cofit | 51 | 97 |
| o | Escherichia coli ECRC101 | MCAODC_26735 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | insig. | 51 | 97 |
| o | Escherichia coli ECRC102 | NIAGMN_05575 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | insig. | 51 | 97 |
| o | Escherichia coli ECRC98 | JDDGAC_11165 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | insig. | 51 | 97 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS03310 | | LysR family transcriptional regulator | insig. | 50 | 97 |
| o | Escherichia fergusonii Becca | EFB2_03488 | | putative HTH-type transcriptional regulator YbdO | insig. | 50 | 97 |
| o | Escherichia coli ECOR38 | HEPCGN_00760 | | LysR family transcriptional regulator | insig. | 50 | 97 |
| o | Escherichia coli ECRC99 | KEDOAH_20450 | ybdO | Uncharacterized HTH-type transcriptional regulator YbdO | no data | 50 | 97 |
| o | Rahnella sp. WP5 | EX31_RS04400 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| | Rahnella sp. WP5 | EX31_RS09080 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_04050 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4542 | | LysR-family transcriptional regulator YbeF | insig. | 29 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS08005 | | transcriptional regulator | insig. | 27 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2334 | | Transcriptional regulator | cofit | 27 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_01288 | | putative HTH-type transcriptional regulator YbdO | strong | 27 | 95 |
| | Escherichia coli ECOR27 | NOLOHH_23770 | ybeF | YbeF family transcriptional regulator | insig. | 27 | 95 |
| | Escherichia coli ECRC62 | BNILDI_21780 | ybeF | YbeF family transcriptional regulator | cofit | 27 | 95 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03077 | | putative HTH-type transcriptional regulator YbdO | insig. | 27 | 95 |
| | Escherichia coli BW25113 | b0629 | ybeF | putative transcriptional regulator LYSR-type (VIMSS) | insig. | 27 | 95 |
| | Escherichia coli ECRC100 | OKFHMN_07395 | ybeF | YbeF family transcriptional regulator | cofit | 27 | 95 |
| | Escherichia coli ECRC101 | MCAODC_26610 | ybeF | YbeF family transcriptional regulator | insig. | 27 | 95 |
| | Escherichia coli ECRC102 | NIAGMN_05450 | ybeF | YbeF family transcriptional regulator | insig. | 27 | 95 |
| | Escherichia coli ECRC98 | JDDGAC_11040 | ybeF | YbeF family transcriptional regulator | insig. | 27 | 95 |
| | Escherichia coli ECRC99 | KEDOAH_20575 | ybeF | YbeF family transcriptional regulator | no data | 27 | 95 |
| | Escherichia coli ECOR38 | HEPCGN_00880 | ybeF | YbeF family transcriptional regulator | insig. | 27 | 95 |
| | Escherichia coli BL21 | ECD_00598 | | LysR family putative transcriptional regulator | insig. | 27 | 95 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_16365 | | YbeF family transcriptional regulator | insig. | 26 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4425 | | Transcriptional regulator, LysR family | insig. | 27 | 91 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07450 | | LysR family transcriptional regulator | insig. | 25 | 87 |
| | Marinobacter adhaerens HP15 | HP15_820 | | transcriptional regulator, LysR family protein | insig. | 24 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30005 | | LysR family transcriptional regulator | insig. | 26 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33740 | | LysR family transcriptional regulator | insig. | 26 | 96 |
| | Marinobacter adhaerens HP15 | HP15_1665 | | transcriptional regulator, LysR family | sig. | 24 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30310 | | LysR family transcriptional regulator | no data | 27 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS10460 | | transcriptional regulator LeuO | insig. | 26 | 90 |
| | Alteromonas macleodii MIT1002 | MIT1002_03000 | | HTH-type transcriptional regulator LeuO | insig. | 23 | 91 |
| | Pseudomonas sp. RS175 | PFR28_00708 | | Nodulation protein D 2 | sig. | 27 | 91 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1109 | | Putative LysR family transcriptional regulator | insig. | 24 | 98 |
| | Pseudomonas segetis P6 | MPMX49_02374 | | PCP degradation transcriptional activation protein | insig. | 27 | 93 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_12920 | | transcriptional regulator LeuO | sig. | 24 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4882 | | Transcriptional regulator MexT | strong | 24 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3062 | | Transcriptional regulator MexT | sig. | 23 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS04680 | | LysR family transcriptional regulator | insig. | 25 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1055 | | Transcriptional regulator MexT | strong | 23 | 94 |
| | Alteromonas macleodii MIT1002 | MIT1002_02750 | | HTH-type transcriptional regulator LeuO | insig. | 26 | 90 |
| | Klebsiella michiganensis M5al | BWI76_RS04690 | | transcriptional regulator LeuO | cofit | 25 | 92 |
| | Pseudomonas sp. DMC3 | GFF2866 | | Nodulation protein D 2 | insig. | 23 | 94 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS05195 | mexT;inference=COORDINATES | multidrug efflux system transcriptional regulator MexT | insig. | 23 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12240 | | multidrug efflux system transcriptional regulator MexT | sig. | 23 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36070 | mexT;inference=COORDINATES | multidrug efflux system transcriptional regulator MexT | insig. | 23 | 94 |
| | Pseudomonas putida KT2440 | PP_2436 | | Transcriptional regulator, LysR family | strong | 26 | 93 |
| | Pseudomonas orientalis W4I3 | QF045_RS16545 | | LysR substrate-binding domain-containing protein | strong | 24 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03120 | | Nodulation protein D 2 | cofit | 24 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27085 | | LysR family transcriptional regulator | strong | 23 | 94 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF162 | | Probable transcriptional activator for leuABCD operon | insig. | 26 | 96 |
| | Pseudomonas segetis P6 | MPMX49_00447 | | HTH-type transcriptional regulator LeuO | insig. | 24 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS25350 | | LysR family transcriptional regulator | insig. | 22 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS24425 | | LysR family transcriptional regulator | insig. | 25 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2473 | | transcriptional regulator, LysR family | insig. | 25 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2473 | | transcriptional regulator, LysR family | insig. | 25 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS15415 | | LysR family transcriptional regulator | insig. | 24 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS15415 | | LysR family transcriptional regulator | sig. | 24 | 94 |
| | Pseudomonas simiae WCS417 | PS417_13375 | | LysR family transcriptional regulator | sig. | 24 | 94 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_12575 | | transcriptional regulator LeuO | insig. | 24 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_3970 | | Transcriptional regulator | sig. | 26 | 93 |
| | Pseudomonas sp. RS175 | PFR28_02648 | | Nodulation protein D 2 | insig. | 25 | 94 |
| | Pseudomonas putida KT2440 | PP_2997 | | CnmA | insig. | 25 | 88 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21965 | | LysR family transcriptional regulator | insig. | 24 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_254 | | Transcriptional regulator, LysR family | sig. | 24 | 94 |
| | Pseudomonas segetis P6 | MPMX49_02403 | | Nodulation protein D 2 | insig. | 24 | 94 |
| | Pseudomonas sp. RS175 | PFR28_01737 | | Nodulation protein D 2 | insig. | 23 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5914 | | Transcriptional regulator, LysR family | insig. | 24 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS05565 | | LysR family transcriptional regulator | insig. | 22 | 94 |
| | Pseudomonas putida KT2440 | PP_2826 | | Transcriptional regulator MexT | sig. | 22 | 94 |
| | Pseudomonas putida KT2440 | PP_2046 | | Transcriptional regulator, LysR family | strong | 27 | 95 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2596 | | Transcriptional regulator, LysR family | insig. | 27 | 93 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01597 | | PCP degradation transcriptional activation protein | cofit | 25 | 94 |
| | Pseudomonas sp. DMC3 | GFF2304 | | Nodulation protein D 2 | insig. | 25 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS07975 | | LysR family transcriptional regulator | insig. | 23 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3992 | | Transcriptional regulator, LysR family | insig. | 26 | 93 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11810 | | LysR family transcriptional regulator | insig. | 24 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27530 | | LysR family transcriptional regulator | insig. | 24 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50300 | | LysR family transcriptional regulator | insig. | 24 | 90 |
| | Ralstonia solanacearum GMI1000 | RS_RS21380 | | LysR family transcriptional regulator | insig. | 24 | 93 |
| | Pseudomonas putida KT2440 | PP_3669 | | Transcriptional regulator, LysR family | insig. | 23 | 94 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3672 | | Transcriptional regulator | insig. | 26 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS18815 | | LysR family transcriptional regulator | insig. | 24 | 93 |
| | Pseudomonas orientalis W4I3 | QF045_RS13875 | | LysR substrate-binding domain-containing protein | cofit | 23 | 94 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS10290 | | LysR family transcriptional regulator | strong | 23 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS51765 | | LysR family transcriptional regulator | sig. | 23 | 90 |
| | Sinorhizobium meliloti 1021 | SMc00283 | | transcriptional regulator | insig. | 24 | 99 |