Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Bacteroides thetaiotaomicron VPI-5482 | BT1396 | | transcription regulator, AraC family (NCBI ptt file) | sig. | 100 | 100 |
o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03520 | | AraC family transcriptional regulator | insig. | 74 | 96 |
| Bacteroides stercoris CC31F | HMPREF1181_RS11110 | | AraC family transcriptional regulator | insig. | 63 | 96 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00810 | | transcriptional regulator, AraC family | insig. | 63 | 96 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0729 | | transcriptional regulator (NCBI ptt file) | insig. | 62 | 98 |
| Bacteroides ovatus ATCC 8483 | BACOVA_02433 | | transcriptional regulator, AraC family | insig. | 59 | 96 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01525 | | helix-turn-helix transcriptional regulator | insig. | 59 | 96 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS15540 | | helix-turn-helix transcriptional regulator | insig. | 59 | 96 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS00425 | | AraC family transcriptional regulator | insig. | 53 | 95 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08505 | | AraC family transcriptional regulator | insig. | 52 | 95 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4180 | | AraC-type DNA-binding domain-containing proteins | insig. | 49 | 94 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08805 | | helix-turn-helix domain-containing protein | insig. | 50 | 97 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS05480 | | helix-turn-helix domain-containing protein | insig. | 47 | 95 |
| Bacteroides stercoris CC31F | HMPREF1181_RS13130 | | helix-turn-helix domain-containing protein | insig. | 47 | 95 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1123 | | transcriptional regulator (NCBI ptt file) | insig. | 47 | 95 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08290 | | helix-turn-helix domain-containing protein | insig. | 47 | 95 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS07620 | | AraC family transcriptional regulator | insig. | 46 | 96 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03490 | | response regulator transcription factor | insig. | 47 | 96 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0728 | | transcriptional regulator (NCBI ptt file) | cofit | 46 | 96 |
| Bacteroides ovatus ATCC 8483 | BACOVA_02432 | | transcriptional regulator, AraC family | insig. | 44 | 96 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03800 | | helix-turn-helix domain-containing protein | insig. | 43 | 96 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08540 | | AraC family transcriptional regulator | insig. | 43 | 95 |
o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09755 | | AraC family transcriptional regulator | insig. | 41 | 96 |
| Bacteroides stercoris CC31F | HMPREF1181_RS11115 | | AraC family transcriptional regulator | cofit | 39 | 96 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09785 | | AraC family transcriptional regulator | cofit | 37 | 96 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS15545 | | AraC family transcriptional regulator | insig. | 38 | 96 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01520 | | helix-turn-helix transcriptional regulator | strong | 37 | 96 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24510 | | AraC family transcriptional regulator | insig. | 38 | 89 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04505 | | AraC family transcriptional regulator | insig. | 33 | 96 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05525 | | AraC family transcriptional regulator | insig. | 36 | 90 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03515 | | response regulator transcription factor | insig. | 40 | 78 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03495 | | hypothetical protein | insig. | 32 | 55 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03710 | | AraC family transcriptional regulator | insig. | 25 | 75 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS02045 | | AraC family transcriptional regulator | insig. | 25 | 75 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13170 | | helix-turn-helix domain-containing protein | insig. | 28 | 52 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS15945 | | helix-turn-helix domain-containing protein | insig. | 32 | 37 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02740 | | AraC family transcriptional regulator | insig. | 26 | 76 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03835 | | AraC family transcriptional regulator | insig. | 36 | 27 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_18840 | | AraC family transcriptional regulator | sig. | 24 | 74 |
| Castellaniella sp019104865 MT123 | ABCV34_RS02740 | | helix-turn-helix domain-containing protein | insig. | 25 | 45 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS18520 | | AraC family transcriptional regulator | insig. | 26 | 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS01545 | | helix-turn-helix domain-containing protein | cofit | 40 | 26 |
| Bacteroides stercoris CC31F | HMPREF1181_RS16105 | | helix-turn-helix domain-containing protein | cofit | 31 | 46 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS11905 | | helix-turn-helix domain-containing protein | insig. | 32 | 36 |
| Phaeobacter inhibens DSM 17395 | PGA1_c02800 | | putative transcriptional regulator, AraC family | strong | 30 | 35 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2226 | | transcriptional regulator (NCBI ptt file) | insig. | 26 | 51 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12720 | | AraC family transcriptional regulator | insig. | 32 | 37 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12720 | | AraC family transcriptional regulator | insig. | 32 | 37 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04760 | | AraC family transcriptional regulator | insig. | 28 | 56 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03728 | | transcriptional regulator, AraC family | insig. | 32 | 36 |
| Azospirillum brasilense Sp245 | AZOBR_RS28145 | | putative transcriptional regulator AraC/XylS family | insig. | 28 | 36 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1235 | | AraC-type transcription regulator (NCBI ptt file) | sig. | 24 | 73 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS16635 | | AraC family transcriptional regulator | insig. | 26 | 56 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14000 | | helix-turn-helix domain-containing protein | cofit | 26 | 79 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1404 | | putative transcriptional regulator (NCBI ptt file) | insig. | 30 | 45 |
| Variovorax sp. SCN45 | GFF1929 | | Transcriptional regulator, AraC family | insig. | 38 | 25 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS09650 | | AraC family transcriptional regulator | strong | 26 | 79 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00812 | | transcriptional regulator, AraC family | insig. | 31 | 45 |
| Variovorax sp. OAS795 | ABID97_RS20685 | | AraC family transcriptional regulator | insig. | 38 | 27 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0559 | | transcriptional regulator (NCBI ptt file) | insig. | 32 | 35 |
| Bacteroides stercoris CC31F | HMPREF1181_RS04015 | | AraC family transcriptional regulator | insig. | 29 | 43 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 28 | 47 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09165 | | AraC family transcriptional regulator | insig. | 37 | 26 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03540 | | AraC family transcriptional regulator | insig. | 35 | 35 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09905 | | AraC family transcriptional regulator | insig. | 29 | 36 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11415 | | AraC family transcriptional regulator | insig. | 31 | 33 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS21020 | | helix-turn-helix transcriptional regulator | insig. | 36 | 28 |
| Caulobacter crescentus NA1000 | CCNA_02486 | | AraC-family transcriptional regulator | insig. | 25 | 37 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02486 | | AraC-family transcriptional regulator | cofit | 25 | 37 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1385 | | transcriptional regulator (NCBI ptt file) | sig. | 24 | 72 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS07130 | | helix-turn-helix transcriptional regulator | insig. | 37 | 27 |
| Agrobacterium fabrum C58 | Atu4545 | | AraC family transcriptional regulator | sig. | 33 | 34 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01105 | | transcriptional regulator, AraC family | insig. | 33 | 29 |
| Bacteroides ovatus ATCC 8483 | BACOVA_04049 | | transcriptional regulator, AraC family | insig. | 37 | 27 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3534 | | AraC-type DNA-binding domain-containing proteins | insig. | 32 | 28 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00527 | | transcriptional regulator, AraC family | insig. | 31 | 34 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1090 | | AraC-type transcription regulator (NCBI ptt file) | sig. | 29 | 39 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01332 | | transcriptional regulator, AraC family | insig. | 39 | 25 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 36 | 27 |
| Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 33 | 28 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS19910 | | AraC family transcriptional regulator | insig. | 31 | 36 |
| Phaeobacter inhibens DSM 17395 | PGA1_c13840 | | putative transcriptional regulator, AraC family | strong | 29 | 34 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_506 | | Transcriptional regulator, AraC family | insig. | 33 | 28 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS25180 | | AraC family transcriptional regulator | insig. | 32 | 27 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13450 | | AraC family transcriptional regulator | insig. | 22 | 65 |
| Bosea sp. OAE506 | ABIE41_RS16450 | | AraC family transcriptional regulator | insig. | 32 | 27 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11790 | | AraC family transcriptional regulator | insig. | 29 | 34 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_2613 | | AraC-type DNA-binding domain-containing proteins | insig. | 29 | 27 |
| Castellaniella sp019104865 MT123 | ABCV34_RS06745 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 28 | 27 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2539 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 37 | 27 |
| Bacteroides stercoris CC31F | HMPREF1181_RS07740 | | AraC family transcriptional regulator | insig. | 35 | 24 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30415 | | AraC family transcriptional regulator | insig. | 31 | 29 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS18555 | | AraC family transcriptional regulator | insig. | 31 | 25 |
| Paraburkholderia graminis OAS925 | ABIE53_002253 | | AraC family transcriptional regulator | insig. | 31 | 29 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS18340 | | helix-turn-helix domain-containing protein | insig. | 28 | 36 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS12250 | | helix-turn-helix domain-containing protein | insig. | 26 | 51 |
| Klebsiella michiganensis M5al | BWI76_RS12430 | | AraC family transcriptional regulator | insig. | 34 | 27 |
| Rhodopseudomonas palustris CGA009 | TX73_006775 | | AraC family transcriptional regulator | insig. | 34 | 26 |
| Pseudomonas sp. RS175 | PFR28_02570 | | HTH-type transcriptional regulator CdhR | insig. | 32 | 27 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2792 | | regulator of the bile salt efflux system (from data) | strong | 29 | 36 |