Homologs of SO3084 from Shewanella oneidensis MR-1

sensory box protein (NCBI ptt file)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3084 sensory box protein (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_1464 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 81 99
o Shewanella loihica PV-4 Shew_2421 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 56 99
o Shewanella amazonensis SB2B Sama_2164 sensory box protein (RefSeq) strong 55 97
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 45 61
o Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 31 96
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 34 68
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 33 68
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 37 60
  Pseudomonas sp. DMC3 GFF511 hypothetical protein cofit 39 48
  Pseudomonas sp. S08-1 OH686_13050 Sensory box/GGDEF family protein cofit 40 47
  Pseudomonas sp. SVBP6 COO64_RS01840 EAL domain-containing protein insig. 39 47
  Pseudomonas fluorescens GW456-L13 PfGW456L13_725 Sensory box/GGDEF family protein insig. 39 47
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2007 Sensory box/GGDEF family protein insig. 38 48
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 38 48
  Pseudomonas fluorescens FW300-N2C3 AO356_11995 diguanylate cyclase insig. 39 46
  Pseudomonas fluorescens FW300-N2E3 AO353_10050 diguanylate cyclase insig. 38 48
  Pseudomonas sp. RS175 PFR28_04522 hypothetical protein insig. 38 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4274 Sensory box/GGDEF family protein insig. 39 47
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 38 47
  Pseudomonas orientalis W4I3 QF045_RS02595 EAL domain-containing protein insig. 38 46
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 38 47
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 38 47
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 36 48
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00115 hypothetical protein cofit 38 47
  Pseudomonas aeruginosa MRSN321 DY961_RS25500 GGDEF and EAL domain-containing protein insig. 39 46
  Pseudomonas aeruginosa PA14 IKLFDK_26205 diguanylate cyclase insig. 39 46
  Pseudomonas aeruginosa PUPa3 DQ20_RS57950 GGDEF and EAL domain-containing protein insig. 39 46
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 39
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein insig. 37 49
  Pseudomonas aeruginosa MRSN321 DY961_RS21370 EAL domain-containing protein strong 37 49
  Pseudomonas aeruginosa PUPa3 DQ20_RS37920 EAL domain-containing protein strong 37 49
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 34 54
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 49
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 33 56
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 36 47
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 39
  Magnetospirillum magneticum AMB-1 AMB_RS22740 GGDEF domain-containing protein insig. 39 43
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 35 50
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 38 40
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 39 42
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 39 42
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 40 39
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 40 38
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 39 42
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 39
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 39 39
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 38 40
  Pseudomonas sp. SVBP6 COO64_RS12500 dibA phosphodiesterase DibA cofit 42 37
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 47
  Pseudomonas orientalis W4I3 QF045_RS26570 EAL domain-containing protein insig. 38 39
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 38 39
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 40
  Pseudomonas sp. DMC3 GFF4251 hypothetical protein cofit 40 39
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 38 40
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 38 39
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 38 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 38 39
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 38 40
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 38 39
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 38 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 38 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 38 39
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 37 47
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 38 39
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 39
  Pseudomonas segetis P6 ACVTMO_RS19720 EAL domain-containing protein strong 37 40
  Pseudomonas sp. BP01 JOY50_RS18490 dibA phosphodiesterase DibA insig. 40 38
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 44
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 38 39
  Azospirillum brasilense Sp245 AZOBR_RS30720 diguanylate cyclase insig. 38 42
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 25 96
  Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 41 38
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 38 39
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 44
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 39
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 39 40
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 38 39
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 40 38
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 35 43
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 39 39
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 39 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 39 38
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 39 41
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 39 39
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 39
  Xanthobacter sp. DMC5 GFF1232 hypothetical protein insig. 36 46
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 39
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 40 39
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 35 47
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4009 GGDEF domain protein strong 40 39
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 38 44
  Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 38 40
  Pseudomonas orientalis W4I3 QF045_RS03990 EAL domain-containing protein cofit 39 38
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 39
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 37 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00407 hypothetical protein cofit 39 38
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 43
  Pseudomonas aeruginosa PUPa3 DQ20_RS55890 morA;inference=COORDINATES cyclic di-GMP receptor MorA sig. 36 40