Homologs of SO2744 from Shewanella oneidensis MR-1

DNA damage response helicase (yejH or radD) (from data)
Original annotation: helicase (NCBI ptt file)
SEED: ATP-dependent RNA helicase YejH

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2744 DNA damage response helicase (yejH or radD) (from data) strong 100 100
o Shewanella sp. ANA-3 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) insig. 95 100
o Shewanella loihica PV-4 Shew_1532 type III restriction enzyme, res subunit (RefSeq) insig. 70 98
o Shewanella amazonensis SB2B Sama_2080 DNA damage response helicase (yejH or radD) (from data) sig. 64 98
o Klebsiella michiganensis M5al BWI76_RS19815 ATP-dependent helicase insig. 54 98
o Pantoea sp. MT58 IAI47_06580 DEAD/DEAH box helicase insig. 54 98
o Escherichia coli ECOR27 NOLOHH_14930 radD Putative DNA repair helicase RadD cofit 55 97
o Escherichia coli ECRC62 BNILDI_13850 radD Putative DNA repair helicase RadD insig. 55 97
o Escherichia coli BL21 ECD_02114 putative ATP-dependent DNA or RNA helicase sig. 55 97
o Escherichia coli ECRC100 OKFHMN_23355 radD Putative DNA repair helicase RadD cofit 55 97
o Escherichia coli ECRC101 MCAODC_14405 radD Putative DNA repair helicase RadD insig. 55 97
o Escherichia coli ECRC102 NIAGMN_21120 radD Putative DNA repair helicase RadD insig. 55 97
o Escherichia coli ECRC98 JDDGAC_27315 radD Putative DNA repair helicase RadD cofit 55 97
o Escherichia coli ECRC99 KEDOAH_04830 radD Putative DNA repair helicase RadD no data 55 97
o Escherichia coli BW25113 b2184 yejH DNA damage response helicase (yejH or radD) (from data) strong 55 97
o Escherichia coli ECOR38 HEPCGN_22620 radD Putative DNA repair helicase RadD cofit 55 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3752 ATP-dependent RNA helicase YejH insig. 54 97
o Escherichia fergusonii Becca EFB2_01672 Putative DNA repair helicase RadD insig. 55 97
o Escherichia coli Nissle 1917 ECOLIN_RS12765 DEAD/DEAH box helicase insig. 55 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01525 Putative DNA repair helicase RadD insig. 55 97
o Pectobacterium carotovorum WPP14 HER17_RS12960 DEAD/DEAH box helicase family protein insig. 54 100
o Enterobacter sp. TBS_079 MPMX20_03150 Putative DNA repair helicase RadD insig. 54 98
o Erwinia amylovora T8 OLJFJH_11705 ATP-dependent helicase insig. 53 98
o Serratia liquefaciens MT49 IAI46_17350 DEAD/DEAH box helicase family protein insig. 53 98
o Rahnella sp. WP5 EX31_RS19200 DEAD/DEAH box helicase insig. 53 98
o Enterobacter asburiae PDN3 EX28DRAFT_0377 DNA or RNA helicases of superfamily II insig. 53 98
o Erwinia tracheiphila SCR3 LU632_RS17600 DEAD/DEAH box helicase insig. 53 98
o Dickeya dadantii 3937 DDA3937_RS09150 DEAD/DEAH box helicase insig. 52 98
o Marinobacter adhaerens HP15 HP15_2832 DNA damage response helicase (yejH or radD) (from data) sig. 52 98
o Dickeya dianthicola 67-19 HGI48_RS09190 DEAD/DEAH box helicase insig. 51 98
o Dickeya dianthicola ME23 DZA65_RS09490 DEAD/DEAH box helicase insig. 51 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_08225 ATP-dependent helicase insig. 50 96
  Magnetospirillum magneticum AMB-1 AMB_RS01810 DNA helicase insig. 35 64
  Bacteroides ovatus ATCC 8483 BACOVA_03889 helicase C-terminal domain protein insig. 35 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18925 DEAD/DEAH box helicase cofit 32 61
  Phocaeicola dorei CL03T12C01 ABI39_RS15790 DEAD/DEAH box helicase insig. 32 61
  Phocaeicola dorei CL03T12C01 ABI39_RS16865 DEAD/DEAH box helicase insig. 28 61
  Phocaeicola dorei CL03T12C01 ABI39_RS14855 DEAD/DEAH box helicase insig. 28 60
  Phocaeicola dorei CL03T12C01 ABI39_RS11135 DEAD/DEAH box helicase sig. 29 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18545 DEAD/DEAH box helicase family protein insig. 29 60
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16220 DEAD/DEAH box helicase insig. 27 60
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03500 DEAD/DEAH box helicase insig. 29 60
  Phocaeicola dorei CL03T12C01 ABI39_RS12105 DEAD/DEAH box helicase insig. 27 60
  Phocaeicola dorei CL03T12C01 ABI39_RS20720 DEAD/DEAH box helicase insig. 30 60
  Synechococcus elongatus PCC 7942 Synpcc7942_0725 DEAD/DEAH box helicase-like insig. 26 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS0119825 DEAD/DEAH box helicase strong 27 60
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF788 ATP-dependent RNA helicase YejH cofit 28 59
  Cellulophaga baltica 18 M666_RS16900 DEAD/DEAH box helicase family protein insig. 27 61
  Dinoroseobacter shibae DFL-12 Dshi_0992 type III restriction protein res subunit (RefSeq) cofit 28 60
  Shewanella oneidensis MR-1 SO0368 helicase (NCBI ptt file) insig. 27 58
  Cellulophaga baltica 18 M666_RS16985 DEAD/DEAH box helicase insig. 25 61
  Bifidobacterium breve UCC2003 BBR_RS10690 DUF3427 domain-containing protein cofit 25 58
  Fusobacterium nucleatum SB010 HUW76_10085 DUF3427 domain-containing protein cofit 26 58
  Variovorax sp. OAS795 ABID97_RS09635 DEAD/DEAH box helicase family protein insig. 25 62
  Shewanella oneidensis MR-1 SO1408 helicase, putative (NCBI ptt file) insig. 26 60
  Alteromonas macleodii MIT1002 MIT1002_00585 UvsW helicase cofit 26 58
  Pseudomonas putida KT2440 PP_4740 Type I restriction enzyme EcoAI R protein insig. 24 65
  Pseudomonas stutzeri RCH2 Psest_3410 DNA or RNA helicases of superfamily II insig. 26 68
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01075 DEAD/DEAH box helicase family protein insig. 23 65
  Shewanella sp. ANA-3 Shewana3_2963 hsdR type I restriction enzyme EcoKI subunit R (RefSeq) insig. 23 58
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4206 Uncharacterized protein conserved in bacteria no data 24 59
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4151 Uncharacterized protein conserved in bacteria no data 24 59
  Escherichia coli ECRC100 OKFHMN_04370 DEAD/DEAH box helicase cofit 25 61
  Escherichia coli ECRC101 MCAODC_23715 DEAD/DEAH box helicase insig. 25 61
  Escherichia coli ECRC102 NIAGMN_03795 DEAD/DEAH box helicase insig. 25 61
  Escherichia coli ECRC98 JDDGAC_07975 DEAD/DEAH box helicase cofit 25 61
  Methylophilus sp. DMC18 GFF1952 hypothetical protein cofit 24 60
  Escherichia coli ECRC99 KEDOAH_23540 DEAD/DEAH box helicase no data 25 61
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3381 FOG: GGDEF domain insig. 24 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_04190 DEAD/DEAH box helicase insig. 25 57
  Pantoea sp. MT58 IAI47_16555 type I restriction-modification system endonuclease insig. 25 58
  Escherichia coli ECOR38 HEPCGN_09450 hsdR DEAD/DEAH box helicase cofit 24 60
  Alteromonas macleodii MIT1002 MIT1002_03395 Type-1 restriction enzyme R protein insig. 24 58
  Shewanella oneidensis MR-1 SO4267 hsdR-2 type I restriction-modification system, R subunit (NCBI ptt file) insig. 22 67
  Escherichia coli BL21 ECD_04216 endonuclease R Type I restriction enzyme insig. 25 58
  Escherichia coli BW25113 b4350 hsdR endonuclease R (RefSeq) insig. 25 58
  Rhodopseudomonas palustris CGA009 TX73_011425 DEAD/DEAH box helicase family protein cofit 23 58
  Escherichia coli ECRC100 OKFHMN_11410 hsdR DEAD/DEAH box helicase insig. 24 60
  Escherichia coli ECRC101 MCAODC_01925 hsdR DEAD/DEAH box helicase insig. 24 60
  Escherichia coli ECRC102 NIAGMN_09260 hsdR DEAD/DEAH box helicase insig. 24 60
  Escherichia coli ECRC98 JDDGAC_15005 hsdR DEAD/DEAH box helicase cofit 24 60
  Escherichia coli ECRC99 KEDOAH_16735 hsdR DEAD/DEAH box helicase no data 24 60
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1002 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 25 62
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0422 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 24 57
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0384 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 24 61
  Shewanella sp. ANA-3 Shewana3_2026 type III restriction enzyme, res subunit (RefSeq) insig. 24 64
  Dinoroseobacter shibae DFL-12 Dshi_3695 type III restriction protein res subunit (RefSeq) no data 24 60
  Dinoroseobacter shibae DFL-12 Dshi_4007 type III restriction protein res subunit (RefSeq) no data 24 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3106 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 23 50
  Pseudomonas sp. RS175 PFR28_03895 hypothetical protein insig. 24 58
  Pseudomonas stutzeri RCH2 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 24 66
  Castellaniella sp019104865 MT123 ABCV34_RS05460 DEAD/DEAH box helicase family protein insig. 21 75
  Alteromonas macleodii MIT1002 MIT1002_02114 DNA phosphorothioation system restriction enzyme insig. 21 58
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10235 hypothetical protein cofit 25 59
  Serratia liquefaciens MT49 IAI46_02405 DEAD/DEAH box helicase family protein insig. 36 16
  Dickeya dianthicola 67-19 HGI48_RS21705 DEAD/DEAH box helicase family protein insig. 23 66
  Pseudomonas sp. S08-1 OH686_22930 DNA repair helicase insig. 27 20
  Alteromonas macleodii MIT1002 MIT1002_00122 UvsW helicase insig. 31 26
  Methanococcus maripaludis JJ MMJJ_RS08465 ATP-dependent helicase insig. 27 20
  Methanococcus maripaludis S2 MMP_RS05890 ATP-dependent helicase insig. 27 20