Conservation of cofitness between Xcc-8004.4824.1 and Xcc-8004.1883.1 in Xanthomonas campestris pv. campestris strain 8004

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4824.1 Beta-glucosidase (EC 3.2.1.21) 1.0 Xcc-8004.1883.1 TldD protein, part of TldE/TldD proteolytic complex 0.61 4
Lysobacter sp. OAE881 0.72 ABIE51_RS01370 glycoside hydrolase family 3 N-terminal domain-containing protein 0.81 ABIE51_RS06795 metalloprotease TldD low > 62
Caulobacter crescentus NA1000 0.58 CCNA_01162 beta-D-glucoside glucohydrolase 0.51 CCNA_03522 Zn-dependent protease TldD low > 66
Caulobacter crescentus NA1000 Δfur 0.58 CCNA_01162 beta-D-glucoside glucohydrolase 0.51 CCNA_03522 Zn-dependent protease TldD low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS16135 glycoside hydrolase family 3 N-terminal domain-containing protein 0.49 A4249_RS10860 metalloprotease TldD low > 48
Variovorax sp. SCN45 0.52 GFF615 beta-glucosidase (EC 3.2.1.21) 0.60 GFF4449 TldD protein, part of TldE/TldD proteolytic complex low > 127
Variovorax sp. OAS795 0.52 ABID97_RS18075 beta-glucosidase BglX 0.59 ABID97_RS06335 metalloprotease TldD low > 91
Pseudomonas sp. RS175 0.41 PFR28_03489 Beta-xylosidase 0.61 PFR28_00161 Metalloprotease TldD low > 88
Dickeya dadantii 3937 0.40 DDA3937_RS08755 beta-glucosidase BglX 0.60 DDA3937_RS01460 metalloprotease TldD 0.75 12
Dickeya dianthicola ME23 0.40 DZA65_RS09150 beta-glucosidase BglX 0.60 DZA65_RS01440 metalloprotease TldD 0.28 69
Dickeya dianthicola 67-19 0.40 HGI48_RS08845 beta-glucosidase BglX 0.60 HGI48_RS01380 metalloprotease TldD low > 71
Enterobacter sp. TBS_079 0.39 MPMX20_03100 Beta-xylosidase 0.59 MPMX20_04151 Metalloprotease TldD low > 85
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0429 Beta-glucosidase-related glycosidases 0.59 EX28DRAFT_3295 Predicted Zn-dependent proteases and their inactivated homologs low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF3813 Periplasmic beta-glucosidase (EC 3.2.1.21) 0.60 GFF2140 TldD protein, part of TldE/TldD proteolytic complex low > 78
Pantoea sp. MT58 0.39 IAI47_13370 beta-glucosidase BglX 0.61 IAI47_02465 metalloprotease TldD low > 76
Klebsiella michiganensis M5al 0.39 BWI76_RS19510 beta-glucosidase 0.60 BWI76_RS25470 metalloprotease TldD low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01578 Beta-glucosidase BoGH3B 0.60 OHPLBJKB_00460 Metalloprotease TldD low > 73
Escherichia coli ECOR38 0.39 HEPCGN_02230 bglX beta-glucosidase BglX 0.60 HEPCGN_16620 tldD metalloprotease TldD low > 87
Escherichia coli BW25113 0.39 b2132 bglX beta-D-glucoside glucohydrolase, periplasmic (NCBI) 0.60 b3244 tldD predicted peptidase (NCBI) low > 76
Escherichia fergusonii Becca 0.38 EFB2_01723 Beta-xylosidase 0.60 EFB2_00586 Metalloprotease TldD 0.52 55
Escherichia coli ECOR27 0.38 NOLOHH_15195 bglX beta-glucosidase BglX 0.60 NOLOHH_09555 tldD metalloprotease TldD low > 75
Escherichia coli ECRC62 0.38 BNILDI_14145 bglX beta-glucosidase BglX 0.60 BNILDI_01980 tldD metalloprotease TldD low > 75
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2809 Periplasmic beta-glucosidase (EC 3.2.1.21) 0.61 Pf6N2E2_3280 TldD protein, part of TldE/TldD proteolytic complex low > 103
Escherichia coli Nissle 1917 0.38 ECOLIN_RS12490 beta-glucosidase BglX 0.60 ECOLIN_RS18595 metalloprotease TldD — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS13250 beta-glucosidase BglX 0.59 HER17_RS20140 metalloprotease TldD low > 75
Pseudomonas putida KT2440 0.38 PP_1403 periplasmic beta-D-glucoside glucohydrolase 0.64 PP_0940 putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD low > 96
Pseudomonas stutzeri RCH2 0.38 Psest_1575 Beta-glucosidase-related glycosidases 0.62 Psest_3320 Predicted Zn-dependent proteases and their inactivated homologs low > 67
Escherichia coli BL21 0.38 ECD_02062 beta-D-glucoside glucohydrolase, periplasmic 0.60 ECD_03104 putative peptidase low > 61
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3261 Periplasmic beta-glucosidase (EC 3.2.1.21) 0.61 Pf1N1B4_1092 TldD protein, part of TldE/TldD proteolytic complex low > 87
Escherichia coli ECRC98 0.38 JDDGAC_27610 bglX beta-glucosidase BglX 0.60 JDDGAC_21380 tldD metalloprotease TldD low > 86
Escherichia coli ECRC99 0.38 KEDOAH_04530 bglX beta-glucosidase BglX 0.60 KEDOAH_10395 tldD metalloprotease TldD — —
Escherichia coli ECRC102 0.38 NIAGMN_21420 bglX beta-glucosidase BglX 0.60 NIAGMN_15515 tldD metalloprotease TldD — —
Escherichia coli ECRC101 0.38 MCAODC_14705 bglX beta-glucosidase BglX 0.60 MCAODC_08275 tldD metalloprotease TldD low > 87
Escherichia coli ECRC100 0.38 OKFHMN_23655 bglX beta-glucosidase BglX 0.60 OKFHMN_17755 tldD metalloprotease TldD low > 80
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3993 Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal 0.63 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3993 Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal 0.63 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 low > 86
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_17375 beta-D-glucoside glucohydrolase 0.61 AO353_05215 protease TldD low > 101
Erwinia tracheiphila SCR3 0.38 LU632_RS09325 bglX beta-glucosidase BglX 0.59 LU632_RS21420 tldD metalloprotease TldD 0.50 25
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_04805 beta-D-glucoside glucohydrolase 0.61 AO356_07095 protease TldD low > 104
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06900 beta-glucosidase BglX 0.62 PFLU_RS04340 metalloprotease TldD low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06900 beta-glucosidase BglX 0.62 PFLU_RS04340 metalloprotease TldD low > 109
Pseudomonas simiae WCS417 0.38 PS417_06840 beta-D-glucoside glucohydrolase 0.62 PS417_04285 protease TldD low > 88
Serratia liquefaciens MT49 0.38 IAI46_06950 beta-glucosidase BglX 0.60 IAI46_22685 metalloprotease TldD low > 86
Bacteroides thetaiotaomicron VPI-5482 0.37 BT1872 periplasmic beta-glucosidase precursor (NCBI ptt file) 0.38 BT3648 putative modulator of DNA gyrase (NCBI ptt file) low > 81
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS26860 beta-D-glucoside glucohydrolase 0.63 RR42_RS05875 protease TldD low > 128
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_4567 Periplasmic beta-glucosidase (EC 3.2.1.21) 0.61 PfGW456L13_5026 TldD protein, part of TldE/TldD proteolytic complex 0.31 35
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS02960 beta-glucosidase BglX 0.36 HMPREF1181_RS03165 TldD/PmbA family protein low > 56
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS23930 beta-D-glucoside glucohydrolase 0.62 HSERO_RS07155 peptidase C69 low > 78
Rahnella sp. WP5 0.36 EX31_RS08330 beta-glucosidase BglX 0.58 EX31_RS12265 metalloprotease TldD low > 89
Rhodospirillum rubrum S1H 0.33 Rru_A3299 Glycoside hydrolase, family 3-like (NCBI) 0.52 Rru_A0567 Peptidase U62, modulator of DNA gyrase (NCBI) low > 58

Not shown: 8 genomes with orthologs for Xcc-8004.4824.1 only; 39 genomes with orthologs for Xcc-8004.1883.1 only