| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sinorhizobium meliloti 1021 | 1.0 | SMc00770 | | putrescine-binding periplasmic protein | 1.0 | SMc02983 | | ornithine, DAP, or arginine decarboxylase | 0.39 | 16 |
| Rhizobium sp. OAE497 | 0.77 | ABIE40_RS03265 | | polyamine ABC transporter substrate-binding protein | 0.91 | ABIE40_RS16685 | | ornithine/lysine decarboxylase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.61 | TX73_010380 | | polyamine ABC transporter substrate-binding protein | 0.71 | TX73_004485 | | type III PLP-dependent enzyme | low | > 86 |
| Agrobacterium fabrum C58 | 0.61 | Atu0609 | | ABC transporter, substrate binding protein (putrescine) | 0.89 | Atu3196 | | ornithine decarboxylase | — | — |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_4284 | | Spermidine/putrescine-binding periplasmic protein | 0.50 | Psest_3350 | | Diaminopimelate decarboxylase | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.55 | PGA1_c34420 | | putrescine-binding periplasmic protein PotF | 0.47 | PGA1_c03800 | | putative lysine/ornithine decarboxylase | low | > 62 |
| Shewanella amazonensis SB2B | 0.54 | Sama_2642 | | polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) | 0.49 | Sama_0410 | | ornithine decarboxylase (RefSeq) | low | > 62 |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_929 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.50 | PfGW456L13_5067 | | Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4514 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.50 | Pf6N2E2_3334 | | Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_2260 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.50 | Pf1N1B4_1136 | | Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) | low | > 87 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_04294 | | Spermidine-binding periplasmic protein SpuE | 0.50 | PFR28_00113 | | Lysine/ornithine decarboxylase | low | > 88 |
| Bosea sp. OAE506 | 0.53 | ABIE41_RS21650 | | polyamine ABC transporter substrate-binding protein | 0.71 | ABIE41_RS08335 | | type III PLP-dependent enzyme | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_13160 | | putrescine ABC transporter, substrate-binding component (from data) | 0.50 | AO356_07310 | | ornithine decarboxylase | low | > 104 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_11465 | | Putrescine ABC transporter putrescine-binding protein PotF | 0.51 | OH686_08755 | | Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.53 | Psyr_4864 | | extracellular solute-binding protein, family 1 | 0.50 | Psyr_4247 | | ornithine decarboxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.53 | Psyr_4864 | | extracellular solute-binding protein, family 1 | 0.50 | Psyr_4247 | | ornithine decarboxylase | low | > 86 |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_3097 | | extracellular solute-binding protein (RefSeq) | 0.49 | Shewana3_3682 | | ornithine decarboxylase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.53 | SO1270 | | polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) | 0.49 | SO4136 | | decarboxylase, pyridoxal-dependent (NCBI ptt file) | low | > 76 |
| Pseudomonas putida KT2440 | 0.53 | PP_5180 | | spermidine/putrescine ABC transporter - periplasmic subunit | 0.50 | PP_0864 | | ornithine decarboxylase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_27120 | | ABC transporter substrate-binding protein | 0.50 | PS417_04005 | | ornithine decarboxylase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS28770 | | polyamine ABC transporter substrate-binding protein | 0.50 | PFLU_RS04045 | | type III PLP-dependent enzyme | 0.32 | 17 |
| Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS28770 | | polyamine ABC transporter substrate-binding protein | 0.50 | PFLU_RS04045 | | type III PLP-dependent enzyme | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_08575 | | ABC transporter substrate-binding protein | 0.50 | AO353_05445 | | ornithine decarboxylase | low | > 101 |
| Rhodospirillum rubrum S1H | 0.51 | Rru_A1018 | | extracellular solute-binding protein, family 1 (NCBI) | 0.51 | Rru_A1693 | | Orn/DAP/Arg decarboxylase 2 (NCBI) | low | > 58 |
| Shewanella loihica PV-4 | 0.50 | Shew_0973 | | extracellular solute-binding protein (RefSeq) | 0.51 | Shew_3392 | | ornithine decarboxylase (RefSeq) | low | > 60 |
| Marinobacter adhaerens HP15 | 0.49 | HP15_940 | | putrescine ABC transporter, periplasmic putrescine-binding protein | 0.51 | HP15_3785 | | ornithine decarboxylase | low | > 73 |
| Magnetospirillum magneticum AMB-1 | 0.46 | AMB_RS13210 | | polyamine ABC transporter substrate-binding protein | 0.58 | AMB_RS07020 | | type III PLP-dependent enzyme | low | > 64 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS08845 | | ABC transporter substrate-binding protein | 0.62 | AZOBR_RS00105 | | ornithine decarboxylase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_04883 | | Spermidine-binding periplasmic protein SpuE | 0.64 | MPMX19_00433 | | Lysine/ornithine decarboxylase | low | > 112 |
| Caulobacter crescentus NA1000 | 0.22 | CCNA_03239 | | spermidine/putrescine-binding protein | 0.20 | CCNA_00365 | | ornithine decarboxylase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.22 | CCNA_03239 | | spermidine/putrescine-binding protein | 0.20 | CCNA_00365 | | ornithine decarboxylase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.08 | Dshi_2123 | | extracellular solute-binding protein family 1 (RefSeq) | 0.45 | Dshi_1375 | | Ornithine decarboxylase (RefSeq) | low | > 64 |
Not shown: 38 genomes with orthologs for SMc00770 only; 2 genomes with orthologs for SMc02983 only