Conservation of cofitness between SMc02983 and SMc00554 in Sinorhizobium meliloti 1021

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc02983 ornithine, DAP, or arginine decarboxylase 1.0 SMc00554 amidophosphoribosyltransferase 0.78 2
Rhizobium sp. OAE497 0.91 ABIE40_RS16685 ornithine/lysine decarboxylase 0.84 ABIE40_RS06270 amidophosphoribosyltransferase — —
Agrobacterium fabrum C58 0.89 Atu3196 ornithine decarboxylase 0.86 Atu1075 amidophosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.71 TX73_004485 type III PLP-dependent enzyme 0.64 TX73_015990 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.71 ABIE41_RS08335 type III PLP-dependent enzyme 0.67 ABIE41_RS17810 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.64 MPMX19_00433 Lysine/ornithine decarboxylase 0.56 MPMX19_00906 Amidophosphoribosyltransferase 0.57 18
Azospirillum brasilense Sp245 0.62 AZOBR_RS00105 ornithine decarboxylase 0.57 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Magnetospirillum magneticum AMB-1 0.58 AMB_RS07020 type III PLP-dependent enzyme 0.56 AMB_RS10545 amidophosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.51 OH686_08755 Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase 0.27 OH686_04420 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.51 HP15_3785 ornithine decarboxylase 0.27 HP15_1821 amidophosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.51 Rru_A1693 Orn/DAP/Arg decarboxylase 2 (NCBI) 0.56 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Shewanella loihica PV-4 0.51 Shew_3392 ornithine decarboxylase (RefSeq) 0.30 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.59 3
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_4247 ornithine decarboxylase 0.27 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_4247 ornithine decarboxylase 0.27 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas stutzeri RCH2 0.50 Psest_3350 Diaminopimelate decarboxylase 0.27 Psest_2579 amidophosphoribosyltransferase low > 67
Pseudomonas fluorescens SBW25 0.50 PFLU_RS04045 type III PLP-dependent enzyme 0.27 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS04045 type III PLP-dependent enzyme 0.27 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_05445 ornithine decarboxylase 0.27 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.50 PS417_04005 ornithine decarboxylase 0.27 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas putida KT2440 0.50 PP_0864 ornithine decarboxylase 0.27 PP_2000 amidophosphoribosyl transferase low > 96
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_07310 ornithine decarboxylase 0.27 AO356_21465 amidophosphoribosyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_3334 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) 0.27 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_5067 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) 0.27 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas sp. RS175 0.50 PFR28_00113 Lysine/ornithine decarboxylase 0.27 PFR28_02811 Amidophosphoribosyltransferase low > 88
Shewanella oneidensis MR-1 0.49 SO4136 decarboxylase, pyridoxal-dependent (NCBI ptt file) 0.29 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_3682 ornithine decarboxylase (RefSeq) 0.29 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.49 Sama_0410 ornithine decarboxylase (RefSeq) 0.30 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Phaeobacter inhibens DSM 17395 0.47 PGA1_c03800 putative lysine/ornithine decarboxylase 0.51 PGA1_c10810 amidophosphoribosyltransferase PurF low > 62
Dinoroseobacter shibae DFL-12 0.45 Dshi_1375 Ornithine decarboxylase (RefSeq) 0.51 Dshi_2132 amidophosphoribosyltransferase (RefSeq) low > 64
Caulobacter crescentus NA1000 0.20 CCNA_00365 ornithine decarboxylase 0.63 CCNA_01730 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_00365 ornithine decarboxylase 0.63 CCNA_01730 amidophosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS14915 type III PLP-dependent enzyme 0.56 A4249_RS03735 amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_3753 Diaminopimelate decarboxylase 0.55 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —

Not shown: 1 genomes with orthologs for SMc02983 only; 60 genomes with orthologs for SMc00554 only