Conservation of cofitness between RS_RS14920 and RS_RS12375 in Ralstonia solanacearum GMI1000

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia solanacearum GMI1000 1.0 RS_RS14920 iron donor protein CyaY 1.0 RS_RS12375 ATP-dependent Clp protease adaptor ClpS 0.82 8
Ralstonia solanacearum PSI07 0.98 RPSI07_RS10260 iron donor protein CyaY 1.00 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS low > 81
Ralstonia solanacearum IBSBF1503 0.94 RALBFv3_RS06980 iron donor protein CyaY 1.00 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS 0.62 20
Ralstonia solanacearum UW163 0.94 UW163_RS06635 iron donor protein CyaY 1.00 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS — —
Ralstonia sp. UNC404CL21Col 0.86 ABZR87_RS02630 iron donor protein CyaY 1.00 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS19045 frataxin 0.93 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS low > 128
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS00945 frataxin 0.78 HSERO_RS07025 ATP-dependent Clp protease ClpS — —
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS17920 protein CyaY 0.80 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS low > 109
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS28070 iron donor protein CyaY 0.80 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS low > 153
Paraburkholderia graminis OAS925 0.50 ABIE53_003747 CyaY protein 0.80 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05608 CyaY protein 0.80 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS — —
Variovorax sp. OAS795 0.47 ABID97_RS23295 iron donor protein CyaY 0.64 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS — —
Shewanella oneidensis MR-1 0.45 SO4311 cyaY cyay protein (NCBI ptt file) 0.51 SO2627 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_0388 frataxin family protein (RefSeq) 0.51 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_00625 iron donor protein CyaY 0.52 CSW01_05800 ATP-dependent Clp protease adaptor ClpS — —
Dechlorosoma suillum PS 0.43 Dsui_1184 iron donor protein CyaY 0.63 Dsui_0008 hypothetical protein — —
Shewanella amazonensis SB2B 0.43 Sama_3252 CyaY protein (RefSeq) 0.48 Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Shewanella loihica PV-4 0.42 Shew_0320 frataxin family protein (RefSeq) 0.50 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Dickeya dianthicola ME23 0.42 DZA65_RS21110 iron donor protein CyaY 0.53 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS low > 75
Acidovorax sp. GW101-3H11 0.41 Ac3H11_4699 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.62 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS — —
Dickeya dianthicola 67-19 0.41 HGI48_RS20065 iron donor protein CyaY 0.53 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS — —
Dickeya dadantii 3937 0.40 DDA3937_RS19910 iron donor protein CyaY 0.53 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS low > 74
Pectobacterium carotovorum WPP14 0.39 HER17_RS01330 iron donor protein CyaY 0.51 HER17_RS12405 ATP-dependent Clp protease adapter ClpS low > 75
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0248 iron donor protein CyaY 0.51 B158DRAFT_1504 Uncharacterized conserved protein low > 40
Enterobacter sp. TBS_079 0.35 MPMX20_04468 Iron-sulfur cluster assembly protein CyaY 0.55 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS low > 85
Escherichia coli Nissle 1917 0.34 ECOLIN_RS21845 iron donor protein CyaY 0.54 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_04246 Iron-sulfur cluster assembly protein CyaY 0.54 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS low > 73
Serratia liquefaciens MT49 0.34 IAI46_00705 iron donor protein CyaY 0.52 IAI46_08510 ATP-dependent Clp protease adapter ClpS low > 86
Enterobacter asburiae PDN3 0.33 EX28DRAFT_4476 iron donor protein CyaY 0.55 EX28DRAFT_2051 Uncharacterized conserved protein — —
Escherichia coli ECOR38 0.32 HEPCGN_13160 cyaY iron donor protein CyaY 0.54 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia fergusonii Becca 0.32 EFB2_04831 Iron-sulfur cluster assembly protein CyaY 0.54 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS low > 86
Escherichia coli BL21 0.32 ECD_03682 iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein 0.54 ECD_00886 regulatory protein for ClpA substrate specificity — —
Escherichia coli ECOR27 0.32 NOLOHH_06585 cyaY iron donor protein CyaY 0.54 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli ECRC62 0.32 BNILDI_04950 cyaY iron donor protein CyaY 0.54 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli BW25113 0.32 b3807 cyaY frataxin-like protein (NCBI) 0.54 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) low > 76
Klebsiella michiganensis M5al 0.31 BWI76_RS01190 iron donor protein CyaY 0.55 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS low > 92
Escherichia coli ECRC98 0.31 JDDGAC_18065 cyaY iron donor protein CyaY 0.54 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS low > 86
Escherichia coli ECRC100 0.31 OKFHMN_14440 cyaY iron donor protein CyaY 0.54 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS low > 80
Escherichia coli ECRC101 0.31 MCAODC_04945 cyaY iron donor protein CyaY 0.54 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia coli ECRC102 0.31 NIAGMN_12195 cyaY iron donor protein CyaY 0.54 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC99 0.31 KEDOAH_13710 cyaY iron donor protein CyaY 0.54 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29255 iron donor protein CyaY 0.51 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29255 iron donor protein CyaY 0.51 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS low > 109
Pseudomonas putida KT2440 0.28 PP_5225 frataxin 0.52 PP_4009 ATP-dependent Clp protease adapter protein ClpS low > 96
Magnetospirillum magneticum AMB-1 0.24 AMB_RS15295 iron donor protein CyaY 0.50 AMB_RS05700 ATP-dependent Clp protease adapter ClpS low > 64

Not shown: 14 genomes with orthologs for RS_RS14920 only; 19 genomes with orthologs for RS_RS12375 only