| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS12910 | | cbb3-type cytochrome c oxidase subunit I | 1.0 | RR42_RS21500 | | cysteine methyltransferase | 0.32 | 17 |
| Ralstonia solanacearum GMI1000 | 0.85 | RS_RS06395 | | cytochrome-c oxidase, cbb3-type subunit I | 0.47 | RS_RS12565 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.85 | RALBFv3_RS15615 | | cytochrome-c oxidase, cbb3-type subunit I | 0.45 | RALBFv3_RS04945 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.85 | UW163_RS13075 | | cytochrome-c oxidase, cbb3-type subunit I | 0.45 | UW163_RS08680 | | methylated-DNA--[protein]-cysteine S-methyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.85 | ABZR87_RS11145 | | cytochrome-c oxidase, cbb3-type subunit I | 0.43 | ABZR87_RS00565 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.85 | RPSI07_RS17740 | | cytochrome-c oxidase, cbb3-type subunit I | 0.47 | RPSI07_RS12345 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.78 | GFF4135 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.40 | GFF5774 | | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | low | > 90 |
| Shewanella loihica PV-4 | 0.77 | Shew_1985 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.32 | Shew_1453 | | methylated-DNA--protein-cysteinemethyltransferase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.76 | Shewana3_2107 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.30 | Shewana3_1421 | | methylated-DNA--protein-cysteine methyltransferase (RefSeq) | low | > 73 |
| Lysobacter sp. OAE881 | 0.76 | ABIE51_RS03855 | | cytochrome-c oxidase, cbb3-type subunit I | 0.30 | ABIE51_RS06260 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 62 |
| Shewanella oneidensis MR-1 | 0.76 | SO2364 | ccoN | cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) | 0.28 | SO3126 | ogt | methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.76 | Ac3H11_968 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.36 | Ac3H11_2213 | | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | low | > 79 |
| Kangiella aquimarina DSM 16071 | 0.76 | B158DRAFT_1966 | | cytochrome c oxidase, cbb3-type, subunit I | 0.34 | B158DRAFT_1110 | | O-6-methylguanine DNA methyltransferase | low | > 40 |
| Pseudomonas fluorescens FW300-N1B4 | 0.76 | Pf1N1B4_3884 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.38 | Pf1N1B4_4080 | | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.76 | PfGW456L13_4056 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.35 | PfGW456L13_2670 | | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | low | > 87 |
| Variovorax sp. OAS795 | 0.75 | ABID97_RS16225 | | cytochrome-c oxidase, cbb3-type subunit I | 0.38 | ABID97_RS21395 | | methylated-DNA--[protein]-cysteine S-methyltransferase | 0.27 | 72 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_20700 | | cbb3-type cytochrome c oxidase subunit I | 0.34 | PS417_06965 | | cysteine methyltransferase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS22320 | | cytochrome-c oxidase, cbb3-type subunit I | 0.34 | PFLU_RS07030 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS22320 | | cytochrome-c oxidase, cbb3-type subunit I | 0.34 | PFLU_RS07030 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.75 | HSERO_RS16055 | | cytochrome oxidase subunit I | 0.30 | HSERO_RS00275 | | methylated-DNA--protein-cysteine methyltransferase | low | > 78 |
| Pseudomonas putida KT2440 | 0.75 | PP_4250 | | cytochrome c oxidase subunit I, cbb3-type | 0.32 | PP_3017 | | O6-methylguanine-DNA methyltransferase | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.75 | Pf6N2E2_2305 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.36 | Pf6N2E2_3240 | | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.75 | AO356_02405 | | cytochrome C oxidase Cbb3 | 0.35 | AO356_06890 | | cysteine methyltransferase | low | > 104 |
| Vibrio cholerae E7946 ATCC 55056 | 0.75 | CSW01_07230 | | cytochrome-c oxidase, cbb3-type subunit I | 0.35 | CSW01_19180 | | cysteine methyltransferase | low | > 62 |
| Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_00585 | | cytochrome C oxidase Cbb3 | 0.34 | AO353_15075 | | cysteine methyltransferase | low | > 101 |
| Variovorax sp. SCN45 | 0.72 | GFF6964 | | Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) | 0.34 | GFF6534 | | Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | low | > 127 |
| Dyella japonica UNC79MFTsu3.2 | 0.64 | ABZR86_RS04450 | | cytochrome-c oxidase, cbb3-type subunit I | 0.31 | ABZR86_RS07770 | | methylated-DNA--[protein]-cysteine S-methyltransferase | 0.33 | 8 |
| Rhodanobacter sp. FW510-T8 | 0.63 | OKGIIK_07655 | ccoN | cytochrome-c oxidase, cbb3-type subunit I | 0.32 | OKGIIK_08370 | adaB | cysteine methyltransferase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.62 | LRK54_RS17230 | | cytochrome-c oxidase, cbb3-type subunit I | 0.31 | LRK54_RS16290 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.62 | LRK55_RS17455 | | cytochrome-c oxidase, cbb3-type subunit I | 0.32 | LRK55_RS16040 | | methylated-DNA--[protein]-cysteine S-methyltransferase | low | > 63 |
Not shown: 23 genomes with orthologs for RR42_RS12910 only; 20 genomes with orthologs for RR42_RS21500 only