Conservation of cofitness between RR42_RS06435 and RR42_RS09010 in Cupriavidus basilensis FW507-4G11

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS06435 2-hydroxyacid dehydrogenase 1.0 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.34 14
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS13840 FAD-binding oxidoreductase 0.52 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS15590 FAD-binding oxidoreductase 0.52 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 81
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS01900 FAD-binding oxidoreductase 0.51 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Ralstonia solanacearum UW163 0.71 UW163_RS15210 FAD-binding oxidoreductase 0.51 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Ralstonia solanacearum GMI1000 0.71 RS_RS07835 FAD-binding oxidoreductase 0.51 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_04480 FAD/FMN-containing dehydrogenase 0.42 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS13750 D-2-hydroxyacid dehydrogenase 0.42 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Paraburkholderia graminis OAS925 0.68 ABIE53_002925 FAD/FMN-containing dehydrogenase 0.43 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 113
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS05170 FAD-binding oxidoreductase 0.42 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 153
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS16560 2-hydroxyacid dehydrogenase 0.22 HSERO_RS23825 hypothetical protein low > 78
Castellaniella sp019104865 MT123 0.57 ABCV34_RS09275 FAD-binding oxidoreductase 0.25 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Variovorax sp. OAS795 0.57 ABID97_RS10060 FAD-binding oxidoreductase 0.20 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 91
Variovorax sp. SCN45 0.57 GFF742 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) 0.22 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_24000 hydroxyacid dehydrogenase 0.25 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_1497 D-2-hydroxyglutarate dehydrogenase 0.24 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 103
Acidovorax sp. GW101-3H11 0.55 Ac3H11_2934 D-2-hydroxyglutarate dehydrogenase 0.22 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 79
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_4424 D-2-hydroxyglutarate dehydrogenase 0.24 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS10975 FAD-binding oxidoreductase 0.22 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS10975 FAD-binding oxidoreductase 0.22 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Dechlorosoma suillum PS 0.51 Dsui_2542 FAD/FMN-dependent dehydrogenase 0.35 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein — —
Caulobacter crescentus NA1000 0.42 CCNA_03500 FAD/FMN-containing dehydrogenase 0.11 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 66
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_03500 FAD/FMN-containing dehydrogenase 0.11 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS05570 FAD-binding oxidoreductase 0.16 A4249_RS15340 tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD — —
Marinobacter adhaerens HP15 0.33 HP15_2553 oxidoreductase, FAD-binding protein 0.21 HP15_1540 protein YfcK — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_08505 FAD-linked oxidase 0.24 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 101
Pseudomonas simiae WCS417 0.32 PS417_27035 FAD-linked oxidase 0.24 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 88
Pseudomonas sp. RS175 0.32 PFR28_04841 putative FAD-linked oxidoreductase 0.23 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 88
Pseudomonas putida KT2440 0.32 PP_5154 putative Oxidoreductase, FAD-binding 0.22 PP_1751 methyltransferase/FAD-dependent oxidoreductase low > 96
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4851 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.24 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4851 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.24 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 low > 86
Pseudomonas sp. S08-1 0.31 OH686_11285 D-2-hydroxyglutarate dehydrogenase 0.24 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 80
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1492 FAD/FMN-containing dehydrogenases 0.13 B158DRAFT_1306 Uncharacterized conserved protein low > 40

Not shown: 19 genomes with orthologs for RR42_RS06435 only; 32 genomes with orthologs for RR42_RS09010 only