Conservation of cofitness between RR42_RS06425 and RR42_RS06555 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS06425 anhydrase 1.0 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) 0.33 9
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_0044 transferase hexapeptide repeat protein 0.59 Psyr_3237 3-oxoacid CoA-transferase
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_0044 transferase hexapeptide repeat protein 0.59 Psyr_3237 3-oxoacid CoA-transferase low > 86
Pseudomonas stutzeri RCH2 0.81 Psest_4319 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.78 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) low > 67
Pseudomonas fluorescens SBW25 0.78 PFLU_RS00235 gamma carbonic anhydrase family protein 0.59 PFLU_RS10585 CoA transferase subunit A low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS00235 gamma carbonic anhydrase family protein 0.59 PFLU_RS10585 CoA transferase subunit A low > 109
Pseudomonas putida KT2440 0.78 PP_0095 putative enzyme of unknown function 0.60 PP_3122 acetoacetyl CoA-transferase (subunit A) low > 96
Pseudomonas simiae WCS417 0.78 PS417_00240 anhydrase 0.59 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_4090 carbonic anhydrase, family 3 0.60 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) low > 103
Pseudomonas sp. RS175 0.78 PFR28_04700 Protein YrdA 0.60 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 88
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_11115 anhydrase 0.60 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_10770 anhydrase 0.60 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_1843 carbonic anhydrase, family 3 0.60 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 87
Kangiella aquimarina DSM 16071 0.69 B158DRAFT_0464 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.63 B158DRAFT_2505 3-oxoacid CoA-transferase, A subunit
Shewanella sp. ANA-3 0.65 Shewana3_0045 carbonic anhydrase (RefSeq) 0.63 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq)
Shewanella amazonensis SB2B 0.65 Sama_0054 carbonic anhydrase (RefSeq) 0.64 Sama_0518 3-oxoacid CoA-transferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.65 SO0042 carbonic anhydrase, family 3 (NCBI ptt file) 0.64 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.63 Shew_3725 carbonic anhydrase (RefSeq) 0.66 Shew_2575 3-oxoacid CoA-transferase, A subunit (RefSeq)
Escherichia coli ECOR38 0.62 HEPCGN_16395 yrdA Protein YrdA 0.41 HEPCGN_22425 atoD acetate CoA-transferase subunit alpha low > 87
Escherichia coli ECRC62 0.62 BNILDI_02155 yrdA Protein YrdA 0.61 BNILDI_17475 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.59 9
Escherichia coli BW25113 0.62 b3279 yrdA putative transferase (VIMSS) 0.41 b2221 atoD acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) low > 76
Escherichia coli ECOR27 0.62 NOLOHH_09365 yrdA Protein YrdA 0.61 NOLOHH_18990 atoD succinyl-CoA--3-ketoacid-CoA transferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00424 Protein YrdA 0.42 OHPLBJKB_01489 Acetate CoA-transferase subunit alpha 0.35 44
Escherichia coli BL21 0.61 ECD_03130 bacterial transferase hexapeptide domain protein 0.41 ECD_02148 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit low > 61
Escherichia fergusonii Becca 0.61 EFB2_00544 Protein YrdA 0.41 EFB2_01634 Acetate CoA-transferase subunit alpha low > 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS18830 gamma carbonic anhydrase family protein 0.41 ECOLIN_RS12970 acetate CoA-transferase subunit alpha
Alteromonas macleodii MIT1002 0.60 MIT1002_00030 carnitine operon protein CaiE 0.62 MIT1002_02001 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 70
Enterobacter sp. TBS_079 0.60 MPMX20_04187 Protein YrdA 0.61 MPMX20_01912 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0048 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.62 EX28DRAFT_1708 3-oxoacid CoA-transferase, A subunit low > 76
Acinetobacter radioresistens SK82 0.53 MPMX26_01050 Protein YrdA 0.81 MPMX26_00627 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.456.1 carbonic anhydrase, family 3 0.79 Xcc-8004.4478.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 74
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4230 carbonic anhydrase, family 3 0.79 Ac3H11_132 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 79
Lysobacter sp. OAE881 0.49 ABIE51_RS01770 gamma carbonic anhydrase family protein 0.81 ABIE51_RS04380 CoA transferase subunit A low > 62
Rhodospirillum rubrum S1H 0.46 Rru_A2420 transferase hexapeptide repeat (NCBI) 0.34 Rru_A1383 Acetate CoA-transferase (NCBI)
Azospirillum sp. SherDot2 0.43 MPMX19_03844 Protein YrdA 0.38 MPMX19_03462 Acetate CoA-transferase subunit alpha low > 112
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS20625 gamma carbonic anhydrase family protein 0.63 ABZR88_RS15870 CoA transferase subunit A low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_14360 gamma carbonic anhydrase family protein 0.65 CA264_04625 succinyl-CoA--3-ketoacid-CoA transferase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS21190 gamma carbonic anhydrase family protein 0.64 CA265_RS06305 succinyl-CoA--3-ketoacid-CoA transferase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_2335 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 0.63 Echvi_3272 3-oxoacid CoA-transferase, A subunit low > 79

Not shown: 26 genomes with orthologs for RR42_RS06425 only; 24 genomes with orthologs for RR42_RS06555 only