Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS06425 | | anhydrase | 1.0 | RR42_RS06555 | | 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) | 0.33 | 9 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.82 | Psyr_0044 | | transferase hexapeptide repeat protein | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | — | — |
Pseudomonas syringae pv. syringae B728a | 0.82 | Psyr_0044 | | transferase hexapeptide repeat protein | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | low | > 86 |
Pseudomonas stutzeri RCH2 | 0.81 | Psest_4319 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | 0.78 | Psest_1078 | | acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) | low | > 67 |
Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS00235 | | gamma carbonic anhydrase family protein | 0.59 | PFLU_RS10585 | | CoA transferase subunit A | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS00235 | | gamma carbonic anhydrase family protein | 0.59 | PFLU_RS10585 | | CoA transferase subunit A | low | > 109 |
Pseudomonas putida KT2440 | 0.78 | PP_0095 | | putative enzyme of unknown function | 0.60 | PP_3122 | | acetoacetyl CoA-transferase (subunit A) | low | > 96 |
Pseudomonas simiae WCS417 | 0.78 | PS417_00240 | | anhydrase | 0.59 | PS417_10525 | | succinyl-CoA:3-ketoacid-CoA transferase | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_4090 | | carbonic anhydrase, family 3 | 0.60 | Pf6N2E2_2111 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) | low | > 103 |
Pseudomonas sp. RS175 | 0.78 | PFR28_04700 | | Protein YrdA | 0.60 | PFR28_01325 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.77 | AO356_11115 | | anhydrase | 0.60 | AO356_21650 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 104 |
Pseudomonas fluorescens FW300-N2E3 | 0.77 | AO353_10770 | | anhydrase | 0.60 | AO353_27935 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.76 | Pf1N1B4_1843 | | carbonic anhydrase, family 3 | 0.60 | Pf1N1B4_5833 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 87 |
Kangiella aquimarina DSM 16071 | 0.69 | B158DRAFT_0464 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | 0.63 | B158DRAFT_2505 | | 3-oxoacid CoA-transferase, A subunit | — | — |
Shewanella sp. ANA-3 | 0.65 | Shewana3_0045 | | carbonic anhydrase (RefSeq) | 0.63 | Shewana3_1667 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.65 | Sama_0054 | | carbonic anhydrase (RefSeq) | 0.64 | Sama_0518 | | 3-oxoacid CoA-transferase (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.65 | SO0042 | | carbonic anhydrase, family 3 (NCBI ptt file) | 0.64 | SO1892 | atoD | acetate CoA-transferase, subunit A (NCBI ptt file) | low | > 76 |
Shewanella loihica PV-4 | 0.63 | Shew_3725 | | carbonic anhydrase (RefSeq) | 0.66 | Shew_2575 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | — | — |
Escherichia coli ECOR38 | 0.62 | HEPCGN_16395 | yrdA | Protein YrdA | 0.41 | HEPCGN_22425 | atoD | acetate CoA-transferase subunit alpha | low | > 87 |
Escherichia coli ECRC62 | 0.62 | BNILDI_02155 | yrdA | Protein YrdA | 0.61 | BNILDI_17475 | atoD | succinyl-CoA--3-ketoacid-CoA transferase | 0.59 | 9 |
Escherichia coli BW25113 | 0.62 | b3279 | yrdA | putative transferase (VIMSS) | 0.41 | b2221 | atoD | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | low | > 76 |
Escherichia coli ECOR27 | 0.62 | NOLOHH_09365 | yrdA | Protein YrdA | 0.61 | NOLOHH_18990 | atoD | succinyl-CoA--3-ketoacid-CoA transferase | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_00424 | | Protein YrdA | 0.42 | OHPLBJKB_01489 | | Acetate CoA-transferase subunit alpha | 0.35 | 44 |
Escherichia coli BL21 | 0.61 | ECD_03130 | | bacterial transferase hexapeptide domain protein | 0.41 | ECD_02148 | | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit | low | > 61 |
Escherichia fergusonii Becca | 0.61 | EFB2_00544 | | Protein YrdA | 0.41 | EFB2_01634 | | Acetate CoA-transferase subunit alpha | low | > 86 |
Escherichia coli Nissle 1917 | 0.61 | ECOLIN_RS18830 | | gamma carbonic anhydrase family protein | 0.41 | ECOLIN_RS12970 | | acetate CoA-transferase subunit alpha | — | — |
Alteromonas macleodii MIT1002 | 0.60 | MIT1002_00030 | | carnitine operon protein CaiE | 0.62 | MIT1002_02001 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 70 |
Enterobacter sp. TBS_079 | 0.60 | MPMX20_04187 | | Protein YrdA | 0.61 | MPMX20_01912 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | low | > 85 |
Enterobacter asburiae PDN3 | 0.60 | EX28DRAFT_0048 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | 0.62 | EX28DRAFT_1708 | | 3-oxoacid CoA-transferase, A subunit | low | > 76 |
Acinetobacter radioresistens SK82 | 0.53 | MPMX26_01050 | | Protein YrdA | 0.81 | MPMX26_00627 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.456.1 | | carbonic anhydrase, family 3 | 0.79 | Xcc-8004.4478.1 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 74 |
Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_4230 | | carbonic anhydrase, family 3 | 0.79 | Ac3H11_132 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | low | > 79 |
Lysobacter sp. OAE881 | 0.49 | ABIE51_RS01770 | | gamma carbonic anhydrase family protein | 0.81 | ABIE51_RS04380 | | CoA transferase subunit A | low | > 62 |
Rhodospirillum rubrum S1H | 0.46 | Rru_A2420 | | transferase hexapeptide repeat (NCBI) | 0.34 | Rru_A1383 | | Acetate CoA-transferase (NCBI) | — | — |
Azospirillum sp. SherDot2 | 0.43 | MPMX19_03844 | | Protein YrdA | 0.38 | MPMX19_03462 | | Acetate CoA-transferase subunit alpha | low | > 112 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS20625 | | gamma carbonic anhydrase family protein | 0.63 | ABZR88_RS15870 | | CoA transferase subunit A | low | > 71 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.39 | CA264_14360 | | gamma carbonic anhydrase family protein | 0.65 | CA264_04625 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 74 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.38 | CA265_RS21190 | | gamma carbonic anhydrase family protein | 0.64 | CA265_RS06305 | | succinyl-CoA--3-ketoacid-CoA transferase | low | > 88 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.37 | Echvi_2335 | | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | 0.63 | Echvi_3272 | | 3-oxoacid CoA-transferase, A subunit | low | > 79 |
Not shown: 26 genomes with orthologs for RR42_RS06425 only; 24 genomes with orthologs for RR42_RS06555 only