Conservation of cofitness between RR42_RS04710 and RR42_RS04250 in Cupriavidus basilensis FW507-4G11

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS04710 50S rRNA methyltransferase 1.0 RR42_RS04250 chemotaxis protein CheY 0.34 2
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.80 ABZR87_RS08580 response regulator low > 80
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.81 RALBFv3_RS12580 response regulator low > 76
Ralstonia solanacearum UW163 0.84 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.81 UW163_RS00985 response regulator — —
Ralstonia solanacearum PSI07 0.84 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.82 RPSI07_RS20675 response regulator low > 81
Ralstonia solanacearum GMI1000 0.84 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.82 RS_RS03365 response regulator — —
Dechlorosoma suillum PS 0.60 Dsui_0451 hypothetical protein 0.65 Dsui_0659 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain — —
Variovorax sp. OAS795 0.57 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.67 ABID97_RS24700 response regulator 0.34 53
Variovorax sp. SCN45 0.57 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) 0.65 GFF2152 twitching motility protein PilH low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF4529 LSU m3Psi1915 methyltransferase RlmH 0.68 GFF643 twitching motility protein PilH low > 90
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.56 Ac3H11_3988 twitching motility protein PilH low > 79
Marinobacter adhaerens HP15 0.53 HP15_604 conserved hypothetical protein CHP00246 0.46 HP15_3514 response regulator receiver domain protein (CheY) low > 73
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 LRK55_RS03960 response regulator low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 LRK54_RS04190 response regulator low > 59
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.46 OKGIIK_11065 ompR two-component system response regulator low > 52
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.49 ABZR86_RS10360 response regulator low > 74
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH 0.48 B158DRAFT_0187 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 40
Pseudomonas simiae WCS417 0.43 PS417_24730 50S rRNA methyltransferase 0.44 PS417_26665 chemotaxis protein CheY — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 PFLU_RS28310 response regulator low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 PFLU_RS28310 response regulator low > 109
Pseudomonas sp. RS175 0.43 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.45 PFR28_04230 Response regulator PleD low > 88
Lysobacter sp. OAE881 0.43 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.51 ABIE51_RS05220 response regulator low > 62
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_15305 50S rRNA methyltransferase 0.46 AO356_13485 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.46 Pf6N2E2_4614 twitching motility protein PilH low > 103
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_06480 50S rRNA methyltransferase 0.44 AO353_08100 chemotaxis protein CheY low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4366 Protein of unknown function DUF163 0.47 Psyr_0489 Response regulator receiver — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4366 Protein of unknown function DUF163 0.47 Psyr_0489 Response regulator receiver — —
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.46 Pf1N1B4_2354 twitching motility protein PilH — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.45 PfGW456L13_1023 twitching motility protein PilH low > 87
Pseudomonas stutzeri RCH2 0.42 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.45 Psest_0298 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Pseudomonas sp. S08-1 0.42 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.46 OH686_10905 twitching motility protein PilH low > 80
Pseudomonas putida KT2440 0.42 PP_4808 23S rRNA m3psi1915 methyltransferase 0.45 PP_4991 Protein PilH — —
Acinetobacter radioresistens SK82 0.39 MPMX26_02301 Ribosomal RNA large subunit methyltransferase H 0.47 MPMX26_02512 Response regulator PleD — —
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH 0.48 Xcc-8004.1503.1 twitching motility protein PilH — —

Not shown: 61 genomes with orthologs for RR42_RS04710 only; 0 genomes with orthologs for RR42_RS04250 only