Conservation of cofitness between RR42_RS06555 and RR42_RS02580 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) 1.0 RR42_RS02580 amino acid ABC transporter permease 0.46 18
Ralstonia solanacearum GMI1000 0.90 RS_RS07905 CoA transferase subunit A 0.86 RS_RS02390 amino acid ABC transporter permease low > 80
Paraburkholderia sabiae LMG 24235 0.86 QEN71_RS05245 CoA transferase subunit A 0.68 QEN71_RS26880 amino acid ABC transporter permease low > 153
Ralstonia solanacearum UW163 0.86 UW163_RS15140 CoA transferase subunit A 0.86 UW163_RS02025 amino acid ABC transporter permease
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS01830 CoA transferase subunit A 0.86 RALBFv3_RS11560 amino acid ABC transporter permease low > 76
Ralstonia solanacearum PSI07 0.85 RPSI07_RS15660 CoA transferase subunit A 0.87 RPSI07_RS21650 amino acid ABC transporter permease low > 81
Burkholderia phytofirmans PsJN 0.84 BPHYT_RS13675 succinyl-CoA:3-ketoacid-CoA transferase 0.71 BPHYT_RS16695 glutamate/aspartate ABC transporter permease GltJ low > 109
Castellaniella sp019104865 MT123 0.82 ABCV34_RS00770 CoA transferase subunit A 0.45 ABCV34_RS14435 amino acid ABC transporter permease low > 48
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04495 3-oxoacid CoA-transferase subunit A 0.71 H281DRAFT_04269 L-glutamate ABC transporter membrane protein /L-aspartate ABC transporter membrane protein low > 103
Acinetobacter radioresistens SK82 0.81 MPMX26_00627 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.49 MPMX26_00677 Glutamate/aspartate import permease protein GltJ
Paraburkholderia graminis OAS925 0.80 ABIE53_002909 3-oxoacid CoA-transferase subunit A 0.71 ABIE53_003509 glutamate/aspartate transport system permease protein low > 113
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS23190 succinyl-CoA:3-ketoacid-CoA transferase 0.73 HSERO_RS17565 glutamate/aspartate ABC transporter permease GltJ
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS13770 CoA transferase subunit A 0.87 ABZR87_RS07525 amino acid ABC transporter permease low > 80
Acidovorax sp. GW101-3H11 0.79 Ac3H11_132 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.40 Ac3H11_1956 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) low > 79
Variovorax sp. OAS795 0.78 ABID97_RS19440 CoA transferase subunit A 0.43 ABID97_RS05940 amino acid ABC transporter permease low > 91
Variovorax sp. SCN45 0.76 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.51 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF5197 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.40 GFF520 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) low > 90
Enterobacter asburiae PDN3 0.62 EX28DRAFT_1708 3-oxoacid CoA-transferase, A subunit 0.62 EX28DRAFT_2317 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Escherichia coli ECOR27 0.61 NOLOHH_18990 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.62 NOLOHH_23645 gltJ glutamate/aspartate ABC transporter permease GltJ
Escherichia coli ECRC62 0.61 BNILDI_17475 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.62 BNILDI_21655 gltJ glutamate/aspartate ABC transporter permease GltJ
Enterobacter sp. TBS_079 0.61 MPMX20_01912 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.62 MPMX20_01305 Glutamate/aspartate import permease protein GltJ low > 85
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.54 Pf1N1B4_772 ABC transporter for L-asparagine and L-glutamate, permease component 1 (from data) low > 87
Pseudomonas putida KT2440 0.60 PP_3122 acetoacetyl CoA-transferase (subunit A) 0.56 PP_1070 glutamate / aspartate ABC transporter - permease subunit low > 96
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) 0.56 Pf6N2E2_5569 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) low > 103
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase 0.55 AO353_16285 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase 0.58 AO356_18225 amino acid ABC transporter permease low > 104
Pseudomonas sp. RS175 0.60 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.55 PFR28_03372 Glutamate/aspartate import permease protein GltJ low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS10585 CoA transferase subunit A 0.58 PFLU_RS05640 amino acid ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.59 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase 0.58 PS417_05555 amino acid ABC transporter permease
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS10585 CoA transferase subunit A 0.58 PFLU_RS05640 amino acid ABC transporter permease low > 109
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_3237 3-oxoacid CoA-transferase 0.60 Psyr_3909 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_3237 3-oxoacid CoA-transferase 0.60 Psyr_3909 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01489 Acetate CoA-transferase subunit alpha 0.62 OHPLBJKB_03059 putative glutamine ABC transporter permease protein GlnM low > 73
Escherichia coli BW25113 0.41 b2221 atoD acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) 0.62 b0654 gltJ glutamate and aspartate transporter subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.41 ECOLIN_RS12970 acetate CoA-transferase subunit alpha 0.61 ECOLIN_RS03520 glutamate/aspartate ABC transporter permease GltJ
Escherichia coli ECOR38 0.41 HEPCGN_22425 atoD acetate CoA-transferase subunit alpha 0.62 HEPCGN_00970 gltJ glutamate/aspartate ABC transporter permease GltJ low > 85
Escherichia coli BL21 0.41 ECD_02148 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 0.62 ECD_00622 glutamate/aspartate ABC transporter permease low > 60
Escherichia fergusonii Becca 0.41 EFB2_01634 Acetate CoA-transferase subunit alpha 0.62 EFB2_03445 Glutamate/aspartate import permease protein GltJ low > 86
Rhodospirillum rubrum S1H 0.34 Rru_A1383 Acetate CoA-transferase (NCBI) 0.46 Rru_A2088 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)

Not shown: 24 genomes with orthologs for RR42_RS06555 only; 20 genomes with orthologs for RR42_RS02580 only