Conservation of cofitness between RR42_RS07425 and RR42_RS00940 in Cupriavidus basilensis FW507-4G11

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS07425 IclR family transcriptional regulator 1.0 RR42_RS00940 biotin synthase 0.51 11
Ralstonia sp. UNC404CL21Col 0.92 ABZR87_RS13415 IclR family transcriptional regulator 0.70 ABZR87_RS06265 biotin synthase BioB low > 80
Ralstonia solanacearum UW163 0.91 UW163_RS14925 IclR family transcriptional regulator 0.71 UW163_RS03115 biotin synthase BioB — —
Ralstonia solanacearum IBSBF1503 0.91 RALBFv3_RS01615 IclR family transcriptional regulator 0.71 RALBFv3_RS10465 biotin synthase BioB low > 76
Ralstonia solanacearum PSI07 0.91 RPSI07_RS15870 IclR family transcriptional regulator 0.71 RPSI07_RS22850 biotin synthase BioB low > 81
Ralstonia solanacearum GMI1000 0.91 RS_RS08105 IclR family transcriptional regulator 0.71 RS_RS01305 biotin synthase — —
Paraburkholderia graminis OAS925 0.80 ABIE53_002788 IclR family KDG regulon transcriptional repressor 0.73 ABIE53_000577 biotin synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_00471 transcriptional regulator, IclR family 0.73 H281DRAFT_02097 biotin synthase low > 103
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS05750 IclR family transcriptional regulator 0.74 QEN71_RS01085 biotin synthase BioB — —
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS12815 IclR family transcriptional regulator 0.73 BPHYT_RS02150 biotin synthase low > 109
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS08180 IclR family transcriptional regulator 0.60 HSERO_RS12235 biotin synthase — —
Acidovorax sp. GW101-3H11 0.69 Ac3H11_532 Predicted Lactate-responsive regulator, IclR family 0.60 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) low > 79
Variovorax sp. SCN45 0.68 GFF1167 Predicted Lactate-responsive regulator, IclR family 0.58 GFF937 Biotin synthase (EC 2.8.1.6) low > 127
Variovorax sp. OAS795 0.68 ABID97_RS14920 IclR family transcriptional regulator 0.59 ABID97_RS13955 biotin synthase BioB low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4283 Predicted Lactate-responsive regulator, IclR family 0.62 GFF3992 Biotin synthase (EC 2.8.1.6) low > 90
Castellaniella sp019104865 MT123 0.62 ABCV34_RS07905 IclR family transcriptional regulator 0.61 ABCV34_RS15280 biotin synthase BioB low > 48
Dechlorosoma suillum PS 0.54 Dsui_0127 transcriptional regulator 0.60 Dsui_1297 biotin synthetase low > 51
Escherichia coli BW25113 0.25 b0272 yagI CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) 0.58 b0775 bioB biotin synthase (NCBI) low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_00555 HTH-type transcriptional regulator XynR 0.58 MPMX20_01403 Biotin synthase low > 85
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3458 transcriptional regulator, IclR family 0.58 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) low > 76
Dickeya dadantii 3937 0.24 DDA3937_RS18500 IclR family transcriptional regulator 0.58 DDA3937_RS08510 biotin synthase BioB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF436 Transcriptional regulator, IclR family 0.58 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Dickeya dianthicola 67-19 0.23 HGI48_RS18425 IclR family transcriptional regulator 0.57 HGI48_RS08675 biotin synthase BioB low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS19560 helix-turn-helix domain-containing protein 0.57 DZA65_RS08965 biotin synthase BioB low > 75
Escherichia coli Nissle 1917 0.23 ECOLIN_RS20440 IclR family transcriptional regulator YiaJ 0.58 ECOLIN_RS04130 biotin synthase BioB low > 55
Serratia liquefaciens MT49 0.23 IAI46_20925 IclR family transcriptional regulator 0.58 IAI46_06525 biotin synthase BioB low > 86
Escherichia coli ECOR38 0.23 HEPCGN_14790 yiaJ IclR family transcriptional regulator YiaJ 0.58 HEPCGN_01640 bioB biotin synthase BioB low > 87
Escherichia coli BL21 0.23 ECD_03426 transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon 0.58 ECD_00742 biotin synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00130 DNA-binding transcriptional repressor YiaJ 0.58 OHPLBJKB_02938 Biotin synthase low > 73
Escherichia fergusonii Becca 0.23 EFB2_00233 DNA-binding transcriptional repressor YiaJ 0.58 EFB2_03330 Biotin synthase low > 86
Escherichia coli ECRC62 0.23 BNILDI_03700 yiaJ IclR family transcriptional regulator YiaJ 0.58 BNILDI_21040 bioB biotin synthase BioB low > 75
Escherichia coli ECOR27 0.23 NOLOHH_07845 yiaJ IclR family transcriptional regulator YiaJ 0.58 NOLOHH_22770 bioB biotin synthase BioB low > 75
Erwinia tracheiphila SCR3 0.23 LU632_RS04225 IclR family transcriptional regulator 0.59 LU632_RS09130 bioB biotin synthase BioB — —
Klebsiella michiganensis M5al 0.22 BWI76_RS27075 IclR family transcriptional regulator 0.58 BWI76_RS08760 biotin synthase low > 92
Pseudomonas simiae WCS417 0.18 PS417_21320 transcriptional regulator 0.59 PS417_26005 biotin synthase low > 88
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_01260 transcriptional regulator 0.59 AO353_07525 biotin synthase low > 101
Pseudomonas fluorescens SBW25 0.17 PFLU_RS22940 IclR family transcriptional regulator 0.59 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS22940 IclR family transcriptional regulator 0.59 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_396 D-galactonate regulator, IclR family 0.59 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_5979 D-galactonate regulator, IclR family 0.60 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Pseudomonas sp. RS175 0.17 PFR28_02983 HTH-type transcriptional regulator XynR 0.60 PFR28_04103 Biotin synthase low > 88
Shewanella sp. ANA-3 0.14 Shewana3_1275 IclR family transcriptional regulator (RefSeq) 0.59 Shewana3_2519 biotin synthase (RefSeq) low > 73

Not shown: 1 genomes with orthologs for RR42_RS07425 only; 50 genomes with orthologs for RR42_RS00940 only