Conservation of cofitness between Psyr_4834 and Psyr_4683 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4834 histidine:proton symporter, AAT family 1.0 Psyr_4683 dethiobiotin synthase 0.32 10
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4834 histidine:proton symporter, AAT family 1.00 Psyr_4683 dethiobiotin synthase low > 86
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01810 amino acid permease 0.82 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01810 amino acid permease 0.82 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas simiae WCS417 0.84 PS417_01755 proline-specific permease 0.83 PS417_25985 dethiobiotin synthetase low > 88
Pseudomonas putida KT2440 0.83 PP_5031 proline (histidine) APC transporter 0.72 PP_0366 dethiobiotin synthetase low > 96
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1580 Histidine transport protein (permease) 0.80 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) low > 87
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_318 Histidine transport protein (permease) 0.81 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_12275 histidine permease (from data) 0.81 AO353_07505 dethiobiotin synthetase low > 101
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS14635 proline-specific permease 0.27 RR42_RS00935 dethiobiotin synthetase — —
Serratia liquefaciens MT49 0.72 IAI46_03655 amino acid permease 0.48 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD low > 86
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09765 amino acid permease 0.35 ABZR87_RS12345 dethiobiotin synthase low > 80
Klebsiella michiganensis M5al 0.66 BWI76_RS08745 proline-specific permease 0.44 BWI76_RS08775 dethiobiotin synthase low > 92
Pantoea sp. MT58 0.65 IAI47_14830 proline-specific permease ProY 0.46 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD low > 76
Dickeya dianthicola ME23 0.64 DZA65_RS05835 proline-specific permease ProY 0.49 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS05510 proline-specific permease ProY 0.49 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD low > 71
Rahnella sp. WP5 0.64 EX31_RS22070 proline-specific permease ProY 0.44 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD low > 89
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.47 EX28DRAFT_2213 dethiobiotin synthase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4300 Proline-specific permease proY 0.41 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Pectobacterium carotovorum WPP14 0.61 HER17_RS16015 proline-specific permease ProY 0.48 HER17_RS13445 dethiobiotin synthase low > 75
Enterobacter sp. TBS_079 0.61 MPMX20_00989 Proline-specific permease ProY 0.47 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Dickeya dadantii 3937 0.60 DDA3937_RS05450 proline-specific permease ProY 0.48 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD low > 74
Escherichia coli ECRC98 0.59 JDDGAC_12185 proY proline-specific permease ProY 0.47 JDDGAC_10020 bioD dethiobiotin synthase low > 86
Escherichia coli ECOR27 0.59 NOLOHH_01460 proY proline-specific permease ProY 0.46 NOLOHH_22755 bioD dethiobiotin synthase low > 75
Escherichia coli ECRC102 0.59 NIAGMN_06585 proY proline-specific permease ProY 0.47 NIAGMN_04430 bioD dethiobiotin synthase — —
Escherichia coli BW25113 0.59 b0402 proY predicted cryptic proline transporter (NCBI) 0.46 b0778 bioD dethiobiotin synthetase (NCBI) low > 76
Escherichia coli ECRC101 0.59 MCAODC_27755 proY proline-specific permease ProY 0.47 MCAODC_25600 bioD dethiobiotin synthase low > 87
Escherichia coli Nissle 1917 0.59 ECOLIN_RS02425 proline-specific permease ProY 0.46 ECOLIN_RS04145 dethiobiotin synthase — —
Escherichia coli ECRC100 0.59 OKFHMN_08530 proY proline-specific permease ProY 0.47 OKFHMN_06385 bioD dethiobiotin synthase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03274 Proline-specific permease ProY 0.47 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Escherichia coli ECOR38 0.59 HEPCGN_07170 proY proline-specific permease ProY 0.46 HEPCGN_01655 bioD dethiobiotin synthase low > 87
Escherichia fergusonii Becca 0.59 EFB2_03655 Proline-specific permease ProY 0.46 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Escherichia coli ECRC99 0.59 KEDOAH_19435 proY proline-specific permease ProY 0.47 KEDOAH_21525 bioD dethiobiotin synthase — —
Escherichia coli BL21 0.59 ECD_00350 proline-specific permease 0.47 ECD_00745 dethiobiotin synthetase low > 61
Escherichia coli ECRC62 0.59 BNILDI_22875 proY proline-specific permease ProY 0.45 BNILDI_21025 bioD dethiobiotin synthase low > 75
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS05185 amino acid permease 0.44 ABZR86_RS12700 dethiobiotin synthase low > 74
Erwinia tracheiphila SCR3 0.56 LU632_RS18885 proY proline-specific permease ProY 0.44 LU632_RS09145 bioD dethiobiotin synthase — —
Pseudomonas sp. RS175 0.55 PFR28_03490 Proline-specific permease ProY 0.79 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_17670 L-alanine and D-alanine permease (from data) 0.80 AO356_14155 dethiobiotin synthetase 0.16 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.80 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) low > 103
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02640 amino acid permease 0.41 LRK55_RS06915 dethiobiotin synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02890 amino acid permease 0.42 LRK54_RS07180 dethiobiotin synthase low > 59
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09870 Amino acid permease 0.42 OKGIIK_16455 bioD dethiobiotin synthase low > 52
Ralstonia solanacearum UW163 0.43 UW163_RS22065 amino acid permease 0.35 UW163_RS14160 dethiobiotin synthase — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS20930 amino acid permease 0.35 RALBFv3_RS00825 dethiobiotin synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter 0.34 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) low > 74
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_1577 L-glutamine and L-histidine transporter (from data) 0.15 Ga0059261_3673 dethiobiotin synthase low > 68

Not shown: 0 genomes with orthologs for Psyr_4834 only; 35 genomes with orthologs for Psyr_4683 only