Conservation of cofitness between Psyr_4834 and Psyr_3954 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4834 histidine:proton symporter, AAT family 1.0 Psyr_3954 GTP-binding protein LepA 0.34 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4834 histidine:proton symporter, AAT family 1.00 Psyr_3954 GTP-binding protein LepA low > 86
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01810 amino acid permease 0.97 PFLU_RS05250 elongation factor 4 low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01810 amino acid permease 0.97 PFLU_RS05250 elongation factor 4 low > 109
Pseudomonas simiae WCS417 0.84 PS417_01755 proline-specific permease 0.97 PS417_05180 elongation factor 4 — —
Pseudomonas putida KT2440 0.83 PP_5031 proline (histidine) APC transporter 0.93 PP_1431 Elongation factor 4 — —
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1580 Histidine transport protein (permease) 0.96 Pf1N1B4_895 Translation elongation factor LepA — —
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_318 Histidine transport protein (permease) 0.96 PfGW456L13_4842 Translation elongation factor LepA low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_12275 histidine permease (from data) 0.97 AO353_04520 elongation factor 4 low > 101
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS14635 proline-specific permease 0.69 RR42_RS14055 elongation factor 4 low > 128
Serratia liquefaciens MT49 0.72 IAI46_03655 amino acid permease 0.74 IAI46_19560 elongation factor 4 low > 86
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09765 amino acid permease 0.67 ABZR87_RS10190 translation elongation factor 4 low > 80
Klebsiella michiganensis M5al 0.66 BWI76_RS08745 proline-specific permease 0.74 BWI76_RS21335 elongation factor 4 — —
Pantoea sp. MT58 0.65 IAI47_14830 proline-specific permease ProY 0.73 IAI47_04870 elongation factor 4 low > 76
Dickeya dianthicola ME23 0.64 DZA65_RS05835 proline-specific permease ProY 0.73 DZA65_RS16910 elongation factor 4 low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS05510 proline-specific permease ProY 0.73 HGI48_RS15830 elongation factor 4 low > 71
Rahnella sp. WP5 0.64 EX31_RS22070 proline-specific permease ProY 0.73 EX31_RS21825 elongation factor 4 low > 89
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.74 EX28DRAFT_0076 elongation factor 4 low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4300 Proline-specific permease proY 0.72 GFF2477 Translation elongation factor LepA low > 78
Enterobacter sp. TBS_079 0.61 MPMX20_00989 Proline-specific permease ProY 0.74 MPMX20_03440 Elongation factor 4 low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS16015 proline-specific permease ProY 0.74 HER17_RS05805 translation elongation factor 4 low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS05450 proline-specific permease ProY 0.74 DDA3937_RS15745 elongation factor 4 low > 74
Escherichia coli ECRC102 0.59 NIAGMN_06585 proY proline-specific permease ProY 0.72 NIAGMN_19170 lepA translation elongation factor 4 — —
Escherichia coli ECRC98 0.59 JDDGAC_12185 proY proline-specific permease ProY 0.72 JDDGAC_25065 lepA translation elongation factor 4 low > 86
Escherichia coli ECOR27 0.59 NOLOHH_01460 proY proline-specific permease ProY 0.72 NOLOHH_13075 lepA translation elongation factor 4 low > 75
Escherichia coli Nissle 1917 0.59 ECOLIN_RS02425 proline-specific permease ProY 0.72 ECOLIN_RS14540 translation elongation factor 4 low > 55
Escherichia coli BW25113 0.59 b0402 proY predicted cryptic proline transporter (NCBI) 0.72 b2569 lepA GTP-binding protein LepA (NCBI) low > 76
Escherichia coli ECRC99 0.59 KEDOAH_19435 proY proline-specific permease ProY 0.72 KEDOAH_06820 lepA translation elongation factor 4 — —
Escherichia coli ECRC62 0.59 BNILDI_22875 proY proline-specific permease ProY 0.72 BNILDI_11875 lepA translation elongation factor 4 low > 75
Escherichia coli ECRC101 0.59 MCAODC_27755 proY proline-specific permease ProY 0.72 MCAODC_11930 lepA translation elongation factor 4 low > 87
Escherichia coli ECOR38 0.59 HEPCGN_07170 proY proline-specific permease ProY 0.72 HEPCGN_20545 lepA translation elongation factor 4 low > 87
Escherichia coli BL21 0.59 ECD_00350 proline-specific permease 0.72 ECD_02463 back-translocating elongation factor EF4, GTPase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03274 Proline-specific permease ProY 0.72 OHPLBJKB_01138 Elongation factor 4 low > 73
Escherichia fergusonii Becca 0.59 EFB2_03655 Proline-specific permease ProY 0.72 EFB2_01327 Elongation factor 4 low > 86
Escherichia coli ECRC100 0.59 OKFHMN_08530 proY proline-specific permease ProY 0.72 OKFHMN_21400 lepA translation elongation factor 4 low > 80
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS05185 amino acid permease 0.71 ABZR86_RS07165 translation elongation factor 4 low > 74
Erwinia tracheiphila SCR3 0.56 LU632_RS18885 proY proline-specific permease ProY 0.74 LU632_RS15395 lepA translation elongation factor 4 0.48 40
Pseudomonas sp. RS175 0.55 PFR28_03490 Proline-specific permease ProY 0.98 PFR28_03525 Elongation factor 4 — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_17670 L-alanine and D-alanine permease (from data) 0.98 AO356_17485 elongation factor 4 low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.98 Pf6N2E2_5423 Translation elongation factor LepA — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02640 amino acid permease 0.71 LRK55_RS16670 translation elongation factor 4 low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02890 amino acid permease 0.71 LRK54_RS16955 translation elongation factor 4 low > 59
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09870 Amino acid permease 0.71 OKGIIK_07885 Elongation factor 4 low > 52
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS20930 amino acid permease 0.67 RALBFv3_RS14470 elongation factor 4 low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS22065 amino acid permease 0.67 UW163_RS11935 elongation factor 4 — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter 0.71 Xcc-8004.3676.1 Translation elongation factor LepA low > 74
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_1577 L-glutamine and L-histidine transporter (from data) 0.61 Ga0059261_3979 elongation factor 4 low > 68

Not shown: 0 genomes with orthologs for Psyr_4834 only; 55 genomes with orthologs for Psyr_3954 only