Conservation of cofitness between Psyr_4754 and Psyr_1718 in Pseudomonas syringae pv. syringae B728a

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.0 Psyr_1718 von Willebrand factor, type A 0.26 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.00 Psyr_1718 von Willebrand factor, type A low > 86
Pseudomonas stutzeri RCH2 0.73 Psest_0255 RNA methyltransferase, RsmD family 0.65 Psest_1940 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.75 Pf6N2E2_622 BatA (Bacteroides aerotolerance operon) low > 103
Pseudomonas sp. S08-1 0.72 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.59 OH686_22240 Aerotolerance protein BatA low > 80
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.71 AO353_23720 BatB protein 0.28 56
Pseudomonas sp. RS175 0.71 PFR28_04262 Ribosomal RNA small subunit methyltransferase D 0.73 PFR28_01592 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.72 AO356_24650 BatB protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.72 Pf1N1B4_4637 BatA (Bacteroides aerotolerance operon) — —
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.75 PFLU_RS17120 VWA domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.75 PFLU_RS17120 VWA domain-containing protein low > 109
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.73 PfGW456L13_3303 BatA (Bacteroides aerotolerance operon) low > 87
Pseudomonas simiae WCS417 0.70 PS417_26825 16S rRNA methyltransferase 0.74 PS417_15100 BatB protein — —
Pseudomonas putida KT2440 0.68 PP_5114 putative adenine methyltransferase 0.67 PP_2029 von Willebrand factor type A domain protein 0.37 80
Marinobacter adhaerens HP15 0.46 HP15_3491 conserved hypothetical protein 0.34 HP15_2273 von Willebrand factor type A domain protein low > 73
Shewanella sp. ANA-3 0.46 Shewana3_3973 putative methyltransferase (RefSeq) 0.38 Shewana3_1456 von Willebrand factor, type A (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.34 CSW01_14850 VWA domain-containing protein low > 62
Shewanella loihica PV-4 0.44 Shew_3607 putative methyltransferase (RefSeq) 0.34 Shew_2430 von Willebrand factor, type A (RefSeq) low > 60
Shewanella oneidensis MR-1 0.43 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) 0.38 SO3093 von Willebrand factor type A domain protein (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.29 OKGIIK_12020 chlD BatB protein low > 52
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19990 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.30 ABZR86_RS11770 VWA domain-containing protein low > 74
Shewanella amazonensis SB2B 0.42 Sama_3469 hypothetical protein (RefSeq) 0.35 Sama_2172 von Willebrand factor type A domain-containing protein (RefSeq) 0.37 16
Rhodanobacter denitrificans MT42 0.42 LRK55_RS13080 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.30 LRK55_RS11600 VWA domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS13340 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.30 LRK54_RS11875 VWA domain-containing protein low > 59
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) 0.39 B158DRAFT_1003 Mg-chelatase subunit ChlD low > 40
Alteromonas macleodii MIT1002 0.37 MIT1002_03683 Ribosomal RNA small subunit methyltransferase D 0.40 MIT1002_01282 VWFA-related Acidobacterial domain protein low > 70
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.10 Ac3H11_1741 BatA (Bacteroides aerotolerance operon) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.12 GFF3386 BatA (Bacteroides aerotolerance operon) low > 90
Dinoroseobacter shibae DFL-12 0.24 Dshi_0115 putative methyltransferase (RefSeq) 0.27 Dshi_3116 von Willebrand factor type A (RefSeq) low > 64
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS04100 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.23 HMPREF1078_RS01845 VWA domain-containing protein — —

Not shown: 54 genomes with orthologs for Psyr_4754 only; 7 genomes with orthologs for Psyr_1718 only