Conservation of cofitness between Psyr_0485 and Psyr_1562 in Pseudomonas syringae pv. syringae B728a

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0485 Protein of unknown function DUF179 1.0 Psyr_1562 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 0.36 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0485 Protein of unknown function DUF179 1.00 Psyr_1562 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2350 UPF0301 protein YqgE 0.76 Pf1N1B4_3343 membrane protein, putative low > 87
Pseudomonas sp. RS175 0.75 PFR28_04234 hypothetical protein 0.76 PFR28_00711 Phosphoethanolamine transferase EptA low > 88
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_13465 hypothetical protein 0.76 AO356_04430 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4609 UPF0301 protein YqgE 0.76 Pf6N2E2_2729 membrane protein, putative low > 103
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1019 UPF0301 protein YqgE 0.77 PfGW456L13_4497 membrane protein, putative low > 87
Pseudomonas sp. S08-1 0.69 OH686_10925 UPF0301 protein YqgE 0.08 OH686_10555 Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue low > 80
Pseudomonas putida KT2440 0.69 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.68 PP_4592 putative metal dependent hydrolase low > 96
Variovorax sp. OAS795 0.45 ABID97_RS24675 YqgE/AlgH family protein 0.35 ABID97_RS19540 phosphoethanolamine--lipid A transferase low > 91
Variovorax sp. SCN45 0.44 GFF2157 UPF0301 protein YqgE 0.33 GFF4041 Lipid A phosphoethanolamine transferase, putative low > 127
Alteromonas macleodii MIT1002 0.43 MIT1002_03056 hypothetical protein 0.29 MIT1002_00302 Phosphoethanolamine transferase EptA low > 70
Shewanella oneidensis MR-1 0.42 SO3346 conserved hypothetical protein (NCBI ptt file) 0.35 SO2048 membrane protein, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_1200 hypothetical protein (RefSeq) 0.34 Shewana3_2228 sulfatase (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3981 UPF0301 protein YqgE 0.36 Ac3H11_3170 membrane protein, putative low > 79
Marinobacter adhaerens HP15 0.42 HP15_3510 transcriptional regulator 0.36 HP15_3587 membrane-associated metal-dependent hydrolase low > 73
Rhizobium sp. OAE497 0.42 ABIE40_RS04185 YqgE/AlgH family protein 0.33 ABIE40_RS08760 phosphoethanolamine--lipid A transferase low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF648 UPF0301 protein YqgE 0.36 GFF2408 inner membrane protein low > 90
Dechlorosoma suillum PS 0.40 Dsui_0593 putative transcriptional regulator 0.35 Dsui_1619 putative membrane-associated, metal-dependent hydrolase low > 51
Pectobacterium carotovorum WPP14 0.40 HER17_RS02630 YqgE/AlgH family protein 0.39 HER17_RS02005 phosphoethanolamine transferase EptA low > 75
Serratia liquefaciens MT49 0.39 IAI46_21395 YqgE/AlgH family protein 0.40 IAI46_11290 phosphoethanolamine transferase EptA low > 86
Dickeya dadantii 3937 0.39 DDA3937_RS18565 YqgE/AlgH family protein 0.38 DDA3937_RS19345 phosphoethanolamine transferase EptA low > 74
Agrobacterium fabrum C58 0.39 Atu0781 hypothetical protein 0.38 Atu4020 hypothetical protein low > 89
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_02485 YqgE/AlgH family protein 0.33 CSW01_19585 phosphoethanolamine transferase low > 62
Pantoea sp. MT58 0.39 IAI47_03610 YqgE/AlgH family protein 0.38 IAI47_21225 phosphoethanolamine transferase EptA low > 76
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.34 SM_b21211 hypothetical protein low > 103
Shewanella amazonensis SB2B 0.38 Sama_2472 putative transcriptional regulator (RefSeq) 0.34 Sama_1758 hypothetical protein (RefSeq) low > 62
Dickeya dianthicola ME23 0.38 DZA65_RS19635 YqgE/AlgH family protein 0.38 DZA65_RS20565 phosphoethanolamine transferase EptA low > 75
Erwinia tracheiphila SCR3 0.38 LU632_RS05475 YqgE/AlgH family protein 0.14 LU632_RS12460 eptB kdo(2)-lipid A phosphoethanolamine 7''-transferase low > 74
Dickeya dianthicola 67-19 0.38 HGI48_RS18500 YqgE/AlgH family protein 0.38 HGI48_RS19445 phosphoethanolamine transferase EptA low > 71
Klebsiella michiganensis M5al 0.38 BWI76_RS24080 DUF179 domain-containing protein 0.37 BWI76_RS08800 phosphoethanolamine transferase EptA low > 92
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1720.1 UPF0301 protein YqgE 0.35 Xcc-8004.3870.1 Inner membrane protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3050 UPF0301 protein YqgE 0.37 GFF1470 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A low > 78
Escherichia coli ECRC101 0.37 MCAODC_09790 yqgE YqgE/AlgH family protein 0.38 MCAODC_03075 eptA phosphoethanolamine transferase EptA low > 87
Escherichia coli ECRC99 0.37 KEDOAH_08870 algH YqgE/AlgH family protein 0.38 KEDOAH_15600 eptA phosphoethanolamine transferase EptA — —
Escherichia coli ECRC98 0.37 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.38 JDDGAC_16200 eptA phosphoethanolamine transferase EptA low > 86
Escherichia coli ECRC100 0.37 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.38 OKFHMN_12565 eptA phosphoethanolamine transferase EptA low > 80
Escherichia coli ECRC62 0.37 BNILDI_09720 yqgE YqgE/AlgH family protein 0.38 BNILDI_06660 eptA phosphoethanolamine transferase EptA low > 75
Escherichia coli ECOR27 0.37 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.38 NOLOHH_04830 eptA phosphoethanolamine transferase EptA low > 75
Escherichia coli ECRC102 0.37 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.38 NIAGMN_10410 eptA phosphoethanolamine transferase EptA — —
Escherichia coli BL21 0.37 ECD_02778 uncharacterized protein 0.38 ECD_03985 lipid A phosphoethanolamine transferase low > 61
Escherichia coli BW25113 0.37 b2948 yqgE orf, hypothetical protein (VIMSS) 0.38 b4114 yjdB orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_00770 hypothetical protein 0.38 OHPLBJKB_03930 Phosphoethanolamine transferase EptA low > 73
Escherichia coli ECOR38 0.37 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.38 HEPCGN_11200 eptA phosphoethanolamine transferase EptA low > 87
Escherichia coli Nissle 1917 0.37 ECOLIN_RS16400 YqgE/AlgH family protein 0.38 ECOLIN_RS23810 phosphoethanolamine transferase EptA low > 55
Escherichia fergusonii Becca 0.37 EFB2_00954 hypothetical protein 0.38 EFB2_04468 Phosphoethanolamine transferase EptA low > 86
Rahnella sp. WP5 0.35 EX31_RS02670 YqgE/AlgH family protein 0.37 EX31_RS10985 phosphoethanolamine--lipid A transferase low > 89
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2986 Putative transcriptional regulator 0.39 EX28DRAFT_1646 Predicted membrane-associated, metal-dependent hydrolase low > 76
Shewanella loihica PV-4 0.35 Shew_1144 hypothetical protein (RefSeq) 0.34 Shew_2041 hypothetical protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.35 MPMX20_03806 hypothetical protein 0.40 MPMX20_01988 Phosphoethanolamine transferase EptA low > 85
Acinetobacter radioresistens SK82 0.33 MPMX26_00238 hypothetical protein 0.34 MPMX26_03175 Phosphoethanolamine transferase EptA low > 36

Not shown: 43 genomes with orthologs for Psyr_0485 only; 3 genomes with orthologs for Psyr_1562 only