Conservation of cofitness between Psyr_4834 and Psyr_1245 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4834 histidine:proton symporter, AAT family 1.0 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.31 16
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4834 histidine:proton symporter, AAT family 1.00 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01810 amino acid permease 0.94 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01810 amino acid permease 0.94 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas simiae WCS417 0.84 PS417_01755 proline-specific permease 0.94 PS417_23160 50S rRNA methyltransferase low > 88
Pseudomonas putida KT2440 0.83 PP_5031 proline (histidine) APC transporter 0.86 PP_0850 Dual-specificity RNA methyltransferase RlmN low > 96
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1580 Histidine transport protein (permease) 0.93 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_318 Histidine transport protein (permease) 0.93 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_12275 histidine permease (from data) 0.94 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase low > 101
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS14635 proline-specific permease 0.55 RR42_RS13155 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Serratia liquefaciens MT49 0.72 IAI46_03655 amino acid permease 0.55 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 86
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09765 amino acid permease 0.55 ABZR87_RS10900 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 80
Klebsiella michiganensis M5al 0.66 BWI76_RS08745 proline-specific permease 0.56 BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 92
Pantoea sp. MT58 0.65 IAI47_14830 proline-specific permease ProY 0.55 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 76
Dickeya dianthicola ME23 0.64 DZA65_RS05835 proline-specific permease ProY 0.55 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS05510 proline-specific permease ProY 0.55 HGI48_RS15590 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 71
Rahnella sp. WP5 0.64 EX31_RS22070 proline-specific permease ProY 0.57 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 89
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.56 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4300 Proline-specific permease proY 0.56 GFF2414 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 78
Pectobacterium carotovorum WPP14 0.61 HER17_RS16015 proline-specific permease ProY 0.56 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.57 61
Enterobacter sp. TBS_079 0.61 MPMX20_00989 Proline-specific permease ProY 0.56 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN low > 85
Dickeya dadantii 3937 0.60 DDA3937_RS05450 proline-specific permease ProY 0.56 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 74
Escherichia coli BL21 0.59 ECD_00350 proline-specific permease 0.56 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent 0.48 28
Escherichia coli ECRC101 0.59 MCAODC_27755 proY proline-specific permease ProY 0.56 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 87
Escherichia fergusonii Becca 0.59 EFB2_03655 Proline-specific permease ProY 0.56 EFB2_01373 Dual-specificity RNA methyltransferase RlmN low > 86
Escherichia coli ECOR27 0.59 NOLOHH_01460 proY proline-specific permease ProY 0.56 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Escherichia coli BW25113 0.59 b0402 proY predicted cryptic proline transporter (NCBI) 0.56 b2517 yfgB predicted enzyme (NCBI) low > 76
Escherichia coli ECRC98 0.59 JDDGAC_12185 proY proline-specific permease ProY 0.56 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 86
Escherichia coli ECRC102 0.59 NIAGMN_06585 proY proline-specific permease ProY 0.56 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli Nissle 1917 0.59 ECOLIN_RS02425 proline-specific permease ProY 0.56 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 55
Escherichia coli ECOR38 0.59 HEPCGN_07170 proY proline-specific permease ProY 0.56 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03274 Proline-specific permease ProY 0.56 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN low > 73
Escherichia coli ECRC99 0.59 KEDOAH_19435 proY proline-specific permease ProY 0.56 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC62 0.59 BNILDI_22875 proY proline-specific permease ProY 0.56 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 75
Escherichia coli ECRC100 0.59 OKFHMN_08530 proY proline-specific permease ProY 0.56 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 80
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS05185 amino acid permease 0.52 ABZR86_RS05455 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 74
Erwinia tracheiphila SCR3 0.56 LU632_RS18885 proY proline-specific permease ProY 0.56 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 74
Pseudomonas sp. RS175 0.55 PFR28_03490 Proline-specific permease ProY 0.93 PFR28_00294 Dual-specificity RNA methyltransferase RlmN low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_17670 L-alanine and D-alanine permease (from data) 0.93 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.93 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02640 amino acid permease 0.53 LRK55_RS18065 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02890 amino acid permease 0.53 LRK54_RS00070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 59
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09870 Amino acid permease 0.53 OKGIIK_07140 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 52
Ralstonia solanacearum UW163 0.43 UW163_RS22065 amino acid permease 0.55 UW163_RS12725 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS20930 amino acid permease 0.55 RALBFv3_RS15260 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter 0.54 Xcc-8004.2737.1 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 74
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_1577 L-glutamine and L-histidine transporter (from data) 0.40 Ga0059261_1407 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 68

Not shown: 0 genomes with orthologs for Psyr_4834 only; 53 genomes with orthologs for Psyr_1245 only