Conservation of cofitness between Psyr_0506 and Psyr_1105 in Pseudomonas syringae pv. syringae B728a

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 1.0 Psyr_1105 TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor 0.32 8
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 1.00 Psyr_1105 TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor 0.40 80
Pseudomonas simiae WCS417 0.91 PS417_02175 transcriptional regulator 0.69 PS417_22710 TonB-dependent receptor low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1489 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.74 Pf1N1B4_607 TonB-dependent hemin , ferrichrome receptor low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3685 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.72 Pf6N2E2_2902 TonB-dependent hemin , ferrichrome receptor low > 103
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_223 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.72 PfGW456L13_1884 TonB-dependent hemin , ferrichrome receptor low > 87
Pseudomonas fluorescens SBW25 0.91 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.66 PFLU_RS24350 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.66 PFLU_RS24350 TonB-dependent receptor low > 109
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_09015 transcriptional regulator 0.72 AO356_05240 TonB-dependent receptor low > 104
Pseudomonas sp. RS175 0.91 PFR28_05053 Bifunctional protein PutA 0.72 PFR28_00557 Transferrin-binding protein 1 low > 88
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.72 AO353_03445 TonB-dependent receptor low > 101
Pseudomonas putida KT2440 0.88 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase 0.68 PP_1006 putative outer membrane heme receptor low > 96
Serratia liquefaciens MT49 0.76 IAI46_15745 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.11 IAI46_12220 TonB-dependent receptor low > 86
Rahnella sp. WP5 0.74 EX31_RS09420 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.11 EX31_RS00500 TonB-dependent receptor low > 89
Escherichia coli ECRC101 0.74 MCAODC_23990 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 MCAODC_06865 chuA TonB-dependent heme/hemoglobin receptor ChuA/ShuA low > 87
Escherichia coli ECRC99 0.74 KEDOAH_23140 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 KEDOAH_11795 chuA TonB-dependent heme/hemoglobin receptor ChuA/ShuA — —
Escherichia coli ECRC98 0.74 JDDGAC_08215 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 JDDGAC_19980 chuA TonB-dependent heme/hemoglobin receptor ChuA/ShuA low > 86
Escherichia coli ECRC102 0.74 NIAGMN_23730 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 NIAGMN_14115 chuA Outer membrane heme/hemoglobin receptor ChuA — —
Escherichia coli ECRC100 0.74 OKFHMN_04605 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 OKFHMN_16350 chuA TonB-dependent heme/hemoglobin receptor ChuA/ShuA low > 80
Escherichia coli Nissle 1917 0.74 ECOLIN_RS05290 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 ECOLIN_RS20030 TonB-dependent heme/hemoglobin receptor ChuA/ShuA low > 55
Escherichia coli ECOR38 0.74 HEPCGN_23535 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.09 HEPCGN_15250 chuA Outer membrane heme/hemoglobin receptor ChuA low > 87
Escherichia fergusonii Becca 0.74 EFB2_03066 Bifunctional protein PutA 0.09 EFB2_00308 Hemin receptor low > 86
Klebsiella michiganensis M5al 0.73 BWI76_RS10795 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.11 BWI76_RS22455 TonB-dependent receptor low > 92
Enterobacter sp. TBS_079 0.73 MPMX20_01702 Bifunctional protein PutA 0.10 MPMX20_01918 Hemin receptor low > 85
Pantoea sp. MT58 0.71 IAI47_08195 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.11 IAI47_03510 TonB-dependent receptor low > 76
Dickeya dadantii 3937 0.71 DDA3937_RS20115 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.11 DDA3937_RS06880 TonB-dependent receptor low > 74
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS20125 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.18 RR42_RS20560 TonB-dependent receptor 0.27 49
Pectobacterium carotovorum WPP14 0.70 HER17_RS01110 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.12 HER17_RS19755 TonB-dependent receptor low > 75
Erwinia tracheiphila SCR3 0.69 LU632_RS13740 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.11 LU632_RS20360 TonB-dependent receptor low > 74
Ralstonia solanacearum GMI1000 0.69 RS_RS16540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.18 RS_RS18330 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor low > 80
Ralstonia solanacearum UW163 0.68 UW163_RS04885 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.18 UW163_RS22820 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS08725 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.18 RALBFv3_RS22275 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor low > 76
Ralstonia solanacearum PSI07 0.68 RPSI07_RS08540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.18 RPSI07_RS00925 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor low > 81
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2850 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.19 Ac3H11_231 TonB-dependent hemin , ferrichrome receptor low > 79
Variovorax sp. SCN45 0.64 GFF5175 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.5.2) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) 0.19 GFF2824 TonB-dependent hemin, ferrichrome receptor low > 127
Azospirillum brasilense Sp245 0.56 AZOBR_RS23695 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.18 AZOBR_RS29470 TonB-dependent receptor low > 97
Sinorhizobium meliloti 1021 0.53 SMc02181 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.15 SMc02726 iron transport protein low > 103
Agrobacterium fabrum C58 0.53 Atu4157 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.13 Atu2287 outer membrane heme receptor low > 89
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS00905 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.15 HSERO_RS00535 TonB-dependent receptor low > 78
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_3926 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.19 Ga0059261_1297 TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein low > 68
Alteromonas macleodii MIT1002 0.38 MIT1002_00637 Bifunctional protein PutA 0.12 MIT1002_03917 putative hemoglobin and hemoglobin-haptoglobin-binding protein 2 precursor low > 70

Not shown: 23 genomes with orthologs for Psyr_0506 only; 11 genomes with orthologs for Psyr_1105 only