Conservation of cofitness between Psyr_1562 and Psyr_0478 in Pseudomonas syringae pv. syringae B728a

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1562 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 1.0 Psyr_0478 pilus retraction ATPase PilT 0.36 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1562 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 1.00 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_4497 membrane protein, putative 0.86 PfGW456L13_1012 Twitching motility protein PilT low > 87
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_3343 membrane protein, putative 0.89 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_04430 hypothetical protein 0.89 AO356_13430 twitching motility protein PilT low > 104
Pseudomonas sp. RS175 0.76 PFR28_00711 Phosphoethanolamine transferase EptA 0.89 PFR28_04241 Twitching mobility protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_2729 membrane protein, putative 0.89 Pf6N2E2_4602 Twitching motility protein PilT low > 103
Pseudomonas putida KT2440 0.68 PP_4592 putative metal dependent hydrolase 0.51 PP_5093 twitching motility protein low > 96
Serratia liquefaciens MT49 0.40 IAI46_11290 phosphoethanolamine transferase EptA 0.41 IAI46_21405 type IV pilus twitching motility protein PilT low > 86
Enterobacter sp. TBS_079 0.40 MPMX20_01988 Phosphoethanolamine transferase EptA 0.45 MPMX20_03808 putative protein YggR low > 85
Pectobacterium carotovorum WPP14 0.39 HER17_RS02005 phosphoethanolamine transferase EptA 0.45 HER17_RS03815 type IV pilus twitching motility protein PilT low > 75
Enterobacter asburiae PDN3 0.39 EX28DRAFT_1646 Predicted membrane-associated, metal-dependent hydrolase 0.44 EX28DRAFT_2988 pilus retraction protein PilT low > 76
Dickeya dianthicola ME23 0.38 DZA65_RS20565 phosphoethanolamine transferase EptA 0.46 DZA65_RS18430 type IV pilus twitching motility protein PilT low > 75
Pantoea sp. MT58 0.38 IAI47_21225 phosphoethanolamine transferase EptA 0.39 IAI47_03600 type IV pilus twitching motility protein PilT low > 76
Dickeya dianthicola 67-19 0.38 HGI48_RS19445 phosphoethanolamine transferase EptA 0.46 HGI48_RS17340 type IV pilus twitching motility protein PilT low > 71
Dickeya dadantii 3937 0.38 DDA3937_RS19345 phosphoethanolamine transferase EptA 0.46 DDA3937_RS17295 type IV pilus twitching motility protein PilT low > 74
Escherichia coli Nissle 1917 0.38 ECOLIN_RS23810 phosphoethanolamine transferase EptA 0.43 ECOLIN_RS16410 type IV pilus twitching motility protein PilT low > 55
Escherichia fergusonii Becca 0.38 EFB2_04468 Phosphoethanolamine transferase EptA 0.43 EFB2_00952 putative protein YggR low > 86
Escherichia coli BL21 0.38 ECD_03985 lipid A phosphoethanolamine transferase 0.42 ECD_02780 putative PilT family AAA+ ATPase low > 61
Escherichia coli ECRC62 0.38 BNILDI_06660 eptA phosphoethanolamine transferase EptA 0.42 BNILDI_09710 yggR Uncharacterized protein YggR low > 75
Escherichia coli ECOR27 0.38 NOLOHH_04830 eptA phosphoethanolamine transferase EptA 0.42 NOLOHH_11130 yggR Uncharacterized protein YggR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03930 Phosphoethanolamine transferase EptA 0.42 OHPLBJKB_00766 putative protein YggR low > 73
Escherichia coli ECRC100 0.38 OKFHMN_12565 eptA phosphoethanolamine transferase EptA 0.42 OKFHMN_19260 yggR Uncharacterized protein YggR low > 80
Escherichia coli ECRC101 0.38 MCAODC_03075 eptA phosphoethanolamine transferase EptA 0.42 MCAODC_09780 yggR Uncharacterized protein YggR low > 87
Escherichia coli ECRC102 0.38 NIAGMN_10410 eptA phosphoethanolamine transferase EptA 0.42 NIAGMN_17025 yggR Uncharacterized protein YggR
Escherichia coli BW25113 0.38 b4114 yjdB orf, hypothetical protein (VIMSS) 0.42 b2950 yggR putative protein transport (VIMSS) low > 76
Escherichia coli ECRC99 0.38 KEDOAH_15600 eptA phosphoethanolamine transferase EptA 0.42 KEDOAH_08880 yggR Uncharacterized protein YggR
Escherichia coli ECRC98 0.38 JDDGAC_16200 eptA phosphoethanolamine transferase EptA 0.42 JDDGAC_22890 yggR Uncharacterized protein YggR low > 86
Escherichia coli ECOR38 0.38 HEPCGN_11200 eptA phosphoethanolamine transferase EptA 0.42 HEPCGN_18565 yggR Uncharacterized protein YggR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF1470 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A 0.41 GFF3053 Twitching motility protein PilT low > 78
Rahnella sp. WP5 0.37 EX31_RS10985 phosphoethanolamine--lipid A transferase 0.42 EX31_RS02680 type IV pilus twitching motility protein PilT low > 89
Klebsiella michiganensis M5al 0.37 BWI76_RS08800 phosphoethanolamine transferase EptA 0.41 BWI76_RS24095 twitching motility protein PilT low > 92
Marinobacter adhaerens HP15 0.36 HP15_3587 membrane-associated metal-dependent hydrolase 0.88 HP15_289 twitching motility protein PilT low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2408 inner membrane protein 0.67 GFF2721 Twitching motility protein PilT low > 90
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3170 membrane protein, putative 0.73 Ac3H11_4473 Twitching motility protein PilT low > 79
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.3870.1 Inner membrane protein 0.80 Xcc-8004.1713.1 Twitching motility protein PilT low > 74
Shewanella oneidensis MR-1 0.35 SO2048 membrane protein, putative (NCBI ptt file) 0.79 SO3351 pilT twitching motility protein PilT (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.35 Dsui_1619 putative membrane-associated, metal-dependent hydrolase 0.74 Dsui_0604 pilus retraction protein PilT low > 51
Variovorax sp. OAS795 0.35 ABID97_RS19540 phosphoethanolamine--lipid A transferase 0.73 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Shewanella sp. ANA-3 0.34 Shewana3_2228 sulfatase (RefSeq) 0.79 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) low > 73
Shewanella amazonensis SB2B 0.34 Sama_1758 hypothetical protein (RefSeq) 0.79 Sama_2476 twitching motility protein (RefSeq) low > 62
Shewanella loihica PV-4 0.34 Shew_2041 hypothetical protein (RefSeq) 0.79 Shew_1138 twitching motility protein (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.34 MPMX26_03175 Phosphoethanolamine transferase EptA 0.82 MPMX26_02405 Twitching mobility protein low > 36
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_19585 phosphoethanolamine transferase 0.68 CSW01_02460 type IV pili twitching motility protein PilT low > 62
Variovorax sp. SCN45 0.33 GFF4041 Lipid A phosphoethanolamine transferase, putative 0.72 GFF3743 Twitching motility protein PilT low > 127
Alteromonas macleodii MIT1002 0.29 MIT1002_00302 Phosphoethanolamine transferase EptA 0.73 MIT1002_03060 Twitching mobility protein low > 70
Desulfovibrio vulgaris Hildenborough JW710 0.14 DVU3376 sulfatase family protein (TIGR) 0.52 DVU1262 pilT-1 twitching motility protein PilT (TIGR) low > 55
Pseudomonas sp. S08-1 0.08 OH686_10555 Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue 0.91 OH686_10970 Twitching motility protein PilT low > 80

Not shown: 6 genomes with orthologs for Psyr_1562 only; 22 genomes with orthologs for Psyr_0478 only