Conservation of cofitness between Psyr_4010 and Psyr_0411 in Pseudomonas syringae pv. syringae B728a

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4010 Citrate-proton symport 1.0 Psyr_0411 glutamate synthase (NADPH) large subunit 0.35 8
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4010 Citrate-proton symport 1.00 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas simiae WCS417 0.86 PS417_06725 alpha-ketoglutarate permease 0.94 PS417_02000 glutamate synthase low > 88
Pseudomonas fluorescens SBW25 0.86 PFLU_RS06750 MFS transporter 0.94 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS06750 MFS transporter 0.94 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_04915 alpha-ketoglutarate permease 0.93 AO356_09375 glutamate synthase low > 104
Pseudomonas orientalis W4I3 0.85 QF045_RS09500 MFS family transporter 0.93 QF045_RS05060 glutamate synthase large subunit low > 93
Pseudomonas sp. DMC3 0.84 GFF2206 Alpha-ketoglutarate permease 0.94 GFF3102 Glutamate synthase [NADPH] large chain low > 89
Pseudomonas lactucae CFBP13502 0.84 GEMAOFIL_01505 Alpha-ketoglutarate permease 0.93 GEMAOFIL_00632 Glutamate synthase [NADPH] large chain low > 96
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_17220 alpha-ketoglutarate permease 0.94 AO353_12515 glutamate synthase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_4587 dicarboxylic acid transporter PcaT 0.93 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_2832 dicarboxylic acid transporter PcaT 0.93 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Pseudomonas sp. RS175 0.83 PFR28_00625 Alpha-ketoglutarate permease 0.93 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Pseudomonas sp. BP01 0.81 JOY50_RS14405 MFS family transporter 0.90 JOY50_RS09320 gltB glutamate synthase large subunit low > 84
Pseudomonas putida KT2440 0.81 PP_1378 alpha-ketoglutarate permease 0.90 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Variovorax sp. SCN45 0.76 GFF5985 dicarboxylic acid transporter PcaT 0.39 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.46 100
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS21430 alpha-ketoglutarate permease 0.38 RR42_RS18990 glutamate synthase low > 128
Variovorax sp. OAS795 0.74 ABID97_RS08005 MFS family transporter 0.39 ABID97_RS23225 glutamate synthase-related protein low > 91
Pseudomonas aeruginosa MRSN321 0.72 DY961_RS27415 MFS family transporter 0.90 DY961_RS11000 gltB;go_function=catalytic glutamate synthase large subunit low > 100
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS31965 MFS family transporter 0.90 DQ20_RS51075 gltB;go_function=catalytic glutamate synthase large subunit low > 101
Pseudomonas aeruginosa PA14 0.71 IKLFDK_24435 alpha-ketoglutarate permease 0.90 IKLFDK_28355 glutamate synthase large subunit low > 98
Serratia liquefaciens MT49 0.68 IAI46_20040 MFS transporter 0.60 IAI46_22345 glutamate synthase large subunit low > 87
Ralstonia solanacearum GMI1000 0.68 RS_RS17550 MFS transporter 0.38 RS_RS14860 glutamate synthase subunit alpha low > 80
Pectobacterium carotovorum WPP14 0.67 HER17_RS04420 MFS transporter 0.59 HER17_RS19910 glutamate synthase large subunit low > 75
Rahnella sp. WP5 0.67 EX31_RS13690 MFS transporter 0.59 EX31_RS12515 glutamate synthase large subunit low > 89
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS16635 MFS family transporter 0.38 ABZR87_RS02570 glutamate synthase-related protein low > 80
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS07390 MFS family transporter 0.38 QEN71_RS28010 glutamate synthase-related protein 0.56 6
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05236 MFS transporter, MHS family, alpha-ketoglutarate permease 0.39 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS16820 2-oxoglutarate:H+ symporter (from data) 0.39 HSERO_RS19595 glutamate synthase low > 78
Ralstonia solanacearum PSI07 0.65 RPSI07_RS00265 MFS transporter 0.38 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF2093 Alpha-ketoglutarate permease 0.58 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 78
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS22995 MFS transporter 0.38 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS11175 alpha-ketoglutarate transporter 0.38 BPHYT_RS17855 glutamate synthase low > 109
Ralstonia solanacearum UW163 0.65 UW163_RS23615 MFS transporter 0.38 UW163_RS06700 glutamate synthase subunit alpha — —
Dickeya dianthicola ME23 0.64 DZA65_RS17945 MFS transporter 0.58 DZA65_RS01635 glutamate synthase large subunit 0.36 61
Enterobacter asburiae PDN3 0.64 EX28DRAFT_0060 metabolite-proton symporter 0.59 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Dickeya dianthicola 67-19 0.64 HGI48_RS16870 MFS transporter 0.59 HGI48_RS01560 glutamate synthase large subunit low > 71
Dickeya dadantii 3937 0.64 DDA3937_RS16800 MFS transporter 0.59 DDA3937_RS01665 glutamate synthase large subunit low > 74
Enterobacter sp. TBS_079 0.64 MPMX20_03456 Alpha-ketoglutarate permease 0.59 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Escherichia coli Nissle 1917 0.62 ECOLIN_RS14640 alpha-ketoglutarate permease 0.59 ECOLIN_RS18475 glutamate synthase large subunit low > 55
Escherichia fergusonii Becca 0.62 EFB2_01309 Alpha-ketoglutarate permease 0.59 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli ECRC98 0.62 JDDGAC_24965 kgtP alpha-ketoglutarate permease 0.59 JDDGAC_21510 gltB glutamate synthase large subunit low > 87
Escherichia coli BL21 0.62 ECD_02481 alpha-ketoglutarate transporter 0.59 ECD_03077 glutamate synthase, large subunit low > 61
Escherichia coli ECRC102 0.62 NIAGMN_19070 kgtP alpha-ketoglutarate permease 0.59 NIAGMN_15645 gltB glutamate synthase large subunit low > 80
Escherichia coli ECRC100 0.62 OKFHMN_21300 kgtP alpha-ketoglutarate permease 0.59 OKFHMN_17885 gltB glutamate synthase large subunit low > 79
Escherichia coli ECOR38 0.62 HEPCGN_20425 kgtP alpha-ketoglutarate permease 0.59 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01119 Alpha-ketoglutarate permease 0.59 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 74
Escherichia coli BW25113 0.62 b2587 kgtP alpha-ketoglutarate transporter (NCBI) 0.59 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia coli ECRC99 0.62 KEDOAH_06920 kgtP alpha-ketoglutarate permease 0.59 KEDOAH_10265 gltB glutamate synthase large subunit — —
Escherichia coli ECOR27 0.62 NOLOHH_12970 kgtP alpha-ketoglutarate permease 0.59 NOLOHH_09685 gltB glutamate synthase large subunit low > 76
Escherichia coli ECRC62 0.62 BNILDI_11775 kgtP alpha-ketoglutarate permease 0.59 BNILDI_01850 gltB glutamate synthase large subunit low > 75
Escherichia coli ECRC101 0.62 MCAODC_11830 kgtP alpha-ketoglutarate permease 0.59 MCAODC_08405 gltB glutamate synthase large subunit low > 87
Klebsiella michiganensis M5al 0.62 BWI76_RS21415 MFS transporter 0.59 BWI76_RS25315 glutamate synthase large subunit low > 92
Klebsiella pneumoniae MKP103 0.62 KDGMDA_28540 alpha-ketoglutarate transporter 0.59 KDGMDA_06145 glutamate synthase large subunit low > 95
Acinetobacter baumannii LAC-4 0.55 RR41_RS12865 MFS transporter 0.68 RR41_RS01595 glutamate synthase large subunit low > 55
Acinetobacter radioresistens SK82 0.52 MPMX26_01705 Alpha-ketoglutarate permease 0.68 MPMX26_02808 Glutamate synthase [NADPH] large chain low > 36
Castellaniella sp019104865 MT123 0.48 ABCV34_RS09940 MFS transporter 0.38 ABCV34_RS11150 glutamate synthase-related protein low > 48

Not shown: 4 genomes with orthologs for Psyr_4010 only; 54 genomes with orthologs for Psyr_0411 only