Conservation of cofitness between Psyr_4088 and Psyr_0358 in Pseudomonas syringae pv. syringae B728a

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4088 ketopantoate reductase 1.0 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein 0.35 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4088 ketopantoate reductase 1.00 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03645 2-dehydropantoate 2-reductase 0.74 AO353_11675 cystine transporter subunit low > 101
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.77 Pf1N1B4_1693 Cystine ABC transporter, periplasmic cystine-binding protein FliY low > 87
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.78 PfGW456L13_444 Cystine ABC transporter, periplasmic cystine-binding protein FliY low > 87
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.74 Pf6N2E2_3919 Cystine ABC transporter, periplasmic cystine-binding protein FliY low > 103
Pseudomonas simiae WCS417 0.68 PS417_22515 2-dehydropantoate 2-reductase 0.73 PS417_01105 cystine transporter subunit low > 88
Pseudomonas sp. RS175 0.68 PFR28_03426 2-dehydropantoate 2-reductase 0.73 PFR28_04855 L-cystine-binding protein FliY low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17955 2-dehydropantoate 2-reductase 0.74 AO356_10235 cystine transporter subunit low > 104
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.74 PFLU_RS01215 cystine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.74 PFLU_RS01215 cystine ABC transporter substrate-binding protein low > 109
Pseudomonas putida KT2440 0.65 PP_1351 putative 2-dehydropantoate 2-reductase 0.70 PP_0227 periplasmic cystine-binding protein low > 96
Pseudomonas sp. S08-1 0.60 OH686_08220 2-dehydropantoate 2-reductase 0.69 OH686_18905 L-cystine ABC transporter (wide substrate range), substrate-binding protein FliY low > 80
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_11730 2-dehydropantoate 2-reductase 0.28 CSW01_00050 amino acid ABC transporter substrate-binding protein low > 62
Shewanella oneidensis MR-1 0.23 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.19 SO1044 amino acid ABC transporter, periplasmic amino acid-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.23 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.20 Shewana3_0882 extracellular solute-binding protein (RefSeq) low > 73
Enterobacter sp. TBS_079 0.22 MPMX20_01016 2-dehydropantoate 2-reductase 0.66 MPMX20_02845 L-cystine-binding protein FliY low > 85
Serratia liquefaciens MT49 0.22 IAI46_04950 2-dehydropantoate 2-reductase 0.66 IAI46_15770 cystine ABC transporter substrate-binding protein low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.65 EX28DRAFT_0627 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS06405 2-dehydropantoate 2-reductase 0.66 BWI76_RS18365 cystine ABC transporter substrate-binding protein low > 92
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.20 Shew_3166 extracellular solute-binding protein (RefSeq) low > 60
Dickeya dianthicola ME23 0.21 DZA65_RS05940 2-dehydropantoate 2-reductase 0.32 DZA65_RS01310 amino acid ABC transporter substrate-binding protein low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.65 ECOLIN_RS10965 cystine ABC transporter substrate-binding protein — —
Escherichia coli BW25113 0.20 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.65 b1920 fliY cystine transporter subunit (NCBI) low > 76
Escherichia coli ECRC99 0.20 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.65 KEDOAH_02300 tcyJ cystine ABC transporter substrate-binding protein — —
Escherichia coli ECRC98 0.20 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.65 JDDGAC_00380 tcyJ cystine ABC transporter substrate-binding protein low > 86
Escherichia coli ECRC102 0.20 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.65 NIAGMN_02260 tcyJ cystine ABC transporter substrate-binding protein — —
Escherichia coli ECRC101 0.20 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.65 MCAODC_19600 tcyJ cystine ABC transporter substrate-binding protein low > 87
Rahnella sp. WP5 0.20 EX31_RS22180 2-dehydropantoate 2-reductase 0.64 EX31_RS09435 cystine ABC transporter substrate-binding protein low > 89
Escherichia coli ECRC100 0.20 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.65 OKFHMN_25790 tcyJ cystine ABC transporter substrate-binding protein low > 80
Escherichia coli ECOR38 0.20 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.65 HEPCGN_04145 tcyJ cystine ABC transporter substrate-binding protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.66 OHPLBJKB_01809 L-cystine-binding protein FliY low > 73
Escherichia coli ECOR27 0.20 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.65 NOLOHH_16410 tcyJ cystine ABC transporter substrate-binding protein low > 75
Dickeya dadantii 3937 0.20 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.31 DDA3937_RS01285 amino acid ABC transporter substrate-binding protein low > 74
Escherichia fergusonii Becca 0.20 EFB2_03632 2-dehydropantoate 2-reductase 0.66 EFB2_02025 L-cystine-binding protein FliY low > 86
Escherichia coli ECRC62 0.20 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.65 BNILDI_15200 tcyJ cystine ABC transporter substrate-binding protein low > 75
Erwinia tracheiphila SCR3 0.20 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.64 LU632_RS13770 tcyJ cystine ABC transporter substrate-binding protein low > 74
Dickeya dianthicola 67-19 0.20 HGI48_RS05615 2-dehydropantoate 2-reductase 0.32 HGI48_RS01265 amino acid ABC transporter substrate-binding protein low > 71
Pantoea sp. MT58 0.20 IAI47_14715 2-dehydropantoate 2-reductase 0.64 IAI47_08175 cystine ABC transporter substrate-binding protein low > 76
Pectobacterium carotovorum WPP14 0.19 HER17_RS15910 2-dehydropantoate 2-reductase 0.31 HER17_RS20280 amino acid ABC transporter substrate-binding protein low > 75
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS15450 2-dehydropantoate 2-reductase 0.24 ABZR87_RS00675 glutamine ABC transporter substrate-binding protein low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS05755 2-dehydropantoate 2-reductase 0.39 HSERO_RS10775 cysteine ABC transporter substrate-binding protein low > 78
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.34 RR42_RS04395 cysteine ABC transporter substrate-binding protein low > 128
Methanococcus maripaludis S2 0.13 MMP_RS03525 ketopantoate reductase family protein 0.18 MMP_RS02910 ABC transporter substrate-binding protein low > 25

Not shown: 5 genomes with orthologs for Psyr_4088 only; 23 genomes with orthologs for Psyr_0358 only