Conservation of cofitness between Pf6N2E2_2479 and Pf6N2E2_2723 in Pseudomonas fluorescens FW300-N2E2

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_2479 Transcription elongation factor GreB 1.0 Pf6N2E2_2723 YcgN (Fragment) 0.27 3
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_03240 transcription elongation factor GreB 0.97 AO356_04400 hypothetical protein low > 104
Pseudomonas sp. RS175 0.97 PFR28_00955 Transcription elongation factor GreB 0.97 PFR28_00716 hypothetical protein 0.26 53
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_2216 Transcription elongation factor GreB 0.97 PfGW456L13_4492 YcgN (Fragment) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_18990 transcription elongation factor GreB 0.94 AO353_17875 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.88 Psest_2339 transcription elongation factor GreB 0.85 Psest_2992 Uncharacterized conserved protein low > 67
Pseudomonas sp. S08-1 0.86 OH686_01805 transcription elongation factor GreB 0.89 OH686_05300 UPF0260 protein YcgN low > 80
Marinobacter adhaerens HP15 0.60 HP15_3481 transcription elongation factor GreB 0.50 HP15_1880 uncharacterized conserved protein UCP006173 low > 73
Shewanella sp. ANA-3 0.54 Shewana3_4014 transcription elongation factor GreB (RefSeq) 0.44 Shewana3_2379 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.53 Shew_3636 transcription elongation factor GreB (RefSeq) 0.45 Shew_2181 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.53 SO4631 greB transcription elongation factor GreB (NCBI ptt file) 0.44 SO2573 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.53 Sama_3509 GreA/GreB family elongation factor (RefSeq) 0.44 Sama_1927 hypothetical protein (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_1929 transcription elongation factor GreB 0.47 B158DRAFT_1576 Uncharacterized conserved protein low > 40
Dickeya dadantii 3937 0.50 DDA3937_RS19625 transcription elongation factor GreB 0.48 DDA3937_RS11190 YcgN family cysteine cluster protein low > 74
Pseudomonas putida KT2440 0.49 PP_2315 Transcription elongation factor GreB 0.84 PP_4587 conserved protein of unknown function low > 96
Dickeya dianthicola ME23 0.48 DZA65_RS20845 transcription elongation factor GreB 0.48 DZA65_RS11570 YcgN family cysteine cluster protein low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS19755 transcription elongation factor GreB 0.48 HGI48_RS11225 YcgN family cysteine cluster protein low > 71
Pseudomonas simiae WCS417 0.48 PS417_08390 transcription elongation factor GreB 0.93 PS417_07400 hypothetical protein low > 88
Pectobacterium carotovorum WPP14 0.48 HER17_RS01650 transcription elongation factor GreB 0.51 HER17_RS11240 YcgN family cysteine cluster protein low > 75
Enterobacter sp. TBS_079 0.48 MPMX20_04293 Transcription elongation factor GreB 0.53 MPMX20_02704 hypothetical protein low > 85
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS08340 transcription elongation factor GreB 0.92 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS08340 transcription elongation factor GreB 0.92 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4137 transcription elongation factor GreB 0.52 EX28DRAFT_0761 Uncharacterized conserved protein low > 76
Serratia liquefaciens MT49 0.47 IAI46_23795 transcription elongation factor GreB 0.50 IAI46_14490 YcgN family cysteine cluster protein low > 86
Acinetobacter radioresistens SK82 0.47 MPMX26_00813 Transcription elongation factor GreB 0.54 MPMX26_02991 hypothetical protein — —
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_13700 transcription elongation factor GreB 0.51 CSW01_05385 YcgN family cysteine cluster protein low > 62
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_298 Transcription elongation factor GreB 0.95 Pf1N1B4_3349 YcgN (Fragment) low > 87
Pantoea sp. MT58 0.47 IAI47_01810 transcription elongation factor GreB 0.50 IAI47_08870 YcgN family cysteine cluster protein low > 76
Escherichia coli ECRC99 0.46 KEDOAH_11110 greB transcription elongation factor GreB 0.53 KEDOAH_25260 ycgN YcgN family cysteine cluster protein — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS19460 transcription elongation factor GreB 0.52 ECOLIN_RS07145 YcgN family cysteine cluster protein — —
Escherichia coli ECOR27 0.46 NOLOHH_08820 greB transcription elongation factor GreB 0.53 NOLOHH_20775 ycgN YcgN family cysteine cluster protein low > 75
Escherichia coli BL21 0.46 ECD_03258 transcript cleavage factor 0.52 ECD_01156 UPF0153 family cysteine cluster protein — —
Escherichia coli BW25113 0.46 b3406 greB transcription elongation factor GreB (NCBI) 0.53 b1181 ycgN conserved protein (RefSeq) low > 76
Escherichia coli ECRC102 0.46 NIAGMN_14800 greB transcription elongation factor GreB 0.53 NIAGMN_27975 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC101 0.46 MCAODC_07560 greB transcription elongation factor GreB 0.53 MCAODC_21925 ycgN YcgN family cysteine cluster protein low > 87
Rahnella sp. WP5 0.46 EX31_RS04835 transcription elongation factor GreB 0.43 EX31_RS10560 YcgN family cysteine cluster protein low > 89
Escherichia coli ECRC100 0.46 OKFHMN_17030 greB transcription elongation factor GreB 0.53 OKFHMN_28245 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECRC98 0.46 JDDGAC_20660 greB transcription elongation factor GreB 0.53 JDDGAC_06265 ycgN YcgN family cysteine cluster protein — —
Escherichia coli ECOR38 0.46 HEPCGN_15840 greB transcription elongation factor GreB 0.53 HEPCGN_24695 ycgN YcgN family cysteine cluster protein low > 87
Escherichia fergusonii Becca 0.46 EFB2_00422 Transcription elongation factor GreB 0.52 EFB2_02750 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00297 Transcription elongation factor GreB 0.53 OHPLBJKB_02510 hypothetical protein low > 73
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2065 transcription elongation factor GreB 0.92 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Klebsiella michiganensis M5al 0.46 BWI76_RS26660 transcription elongation factor GreB 0.53 BWI76_RS17765 hypothetical protein low > 92
Erwinia tracheiphila SCR3 0.46 LU632_RS22950 greB transcription elongation factor GreB 0.50 LU632_RS13100 YcgN family cysteine cluster protein low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2065 transcription elongation factor GreB 0.92 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF612 Transcription elongation factor GreB 0.52 GFF2813 YcgN (Fragment) low > 78
Alteromonas macleodii MIT1002 0.45 MIT1002_04011 Transcript cleavage factor GreB 0.38 MIT1002_02583 hypothetical protein low > 70
Magnetospirillum magneticum AMB-1 0.38 AMB_RS22350 transcription elongation factor GreB 0.48 AMB_RS02675 YcgN family cysteine cluster protein low > 64
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_0216 transcription elongation factor GreB 0.45 Ga0059261_2183 Uncharacterized conserved protein low > 68

Not shown: 23 genomes with orthologs for Pf6N2E2_2479 only; 11 genomes with orthologs for Pf6N2E2_2723 only