Conservation of cofitness between Pf1N1B4_1091 and Pf1N1B4_4001 in Pseudomonas fluorescens FW300-N1B4

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1091 FIG138315: Putative alpha helix protein 1.0 Pf1N1B4_4001 Membrane fusion component of tripartite multidrug resistance system 0.29 14
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_5025 FIG138315: Putative alpha helix protein 0.88 PfGW456L13_2605 Membrane fusion component of tripartite multidrug resistance system low > 87
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_07090 hypothetical protein 0.85 AO356_01030 hemolysin D low > 104
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_05210 hypothetical protein 0.88 AO353_27845 hemolysin D low > 101
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3279 FIG138315: Putative alpha helix protein 0.86 Pf6N2E2_148 Membrane fusion component of tripartite multidrug resistance system low > 103
Pseudomonas sp. RS175 0.93 PFR28_00162 hypothetical protein 0.87 PFR28_02748 Multidrug export protein EmrA low > 88
Pseudomonas fluorescens SBW25 0.91 PFLU_RS04345 ribosome-associated protein 0.83 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS04345 ribosome-associated protein 0.83 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit low > 109
Pseudomonas simiae WCS417 0.91 PS417_04290 hypothetical protein 0.82 PS417_16915 hemolysin D low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_4155 Protein of unknown function DUF615 0.77 Psyr_1730 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_4155 Protein of unknown function DUF615 0.77 Psyr_1730 Secretion protein HlyD low > 86
Pseudomonas putida KT2440 0.75 PP_0941 putative ribosome associated protein 0.72 PP_3549 multidrug efflux transport system - membrane fusion protein low > 96
Pectobacterium carotovorum WPP14 0.38 HER17_RS20095 ribosome-associated protein 0.40 HER17_RS04465 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1884.1 FIG138315: Putative alpha helix protein 0.53 Xcc-8004.3525.1 Membrane fusion component of tripartite multidrug resistance system — —
Serratia liquefaciens MT49 0.36 IAI46_22590 ribosome-associated protein 0.38 IAI46_20000 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Dickeya dadantii 3937 0.36 DDA3937_RS01495 ribosome-associated protein 0.47 DDA3937_RS07310 efflux RND transporter periplasmic adaptor subunit low > 74
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3421 Uncharacterized protein conserved in bacteria 0.39 EX28DRAFT_2768 efflux pump membrane protein (multidrug resistance protein A) — —
Enterobacter sp. TBS_079 0.34 MPMX20_00516 hypothetical protein 0.40 MPMX20_03563 Multidrug export protein EmrA — —
Pantoea sp. MT58 0.34 IAI47_02760 ribosome-associated protein 0.36 IAI47_04500 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Dickeya dianthicola ME23 0.34 DZA65_RS01475 ribosome-associated protein 0.46 DZA65_RS08725 HlyD family efflux transporter periplasmic adaptor subunit — —
Dickeya dianthicola 67-19 0.34 HGI48_RS01410 ribosome-associated protein 0.46 HGI48_RS08130 efflux RND transporter periplasmic adaptor subunit 0.49 56
Rahnella sp. WP5 0.34 EX31_RS12315 ribosome-associated protein 0.40 EX31_RS13655 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF903 FIG138315: Putative alpha helix protein 0.38 GFF1592 Multidrug resistance protein A — —
Escherichia coli ECOR38 0.33 HEPCGN_10130 yjgA ribosome-associated protein 0.39 HEPCGN_19975 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 87
Escherichia fergusonii Becca 0.33 EFB2_04299 hypothetical protein 0.39 EFB2_01243 Multidrug export protein EmrA low > 86
Escherichia coli ECRC101 0.33 MCAODC_02435 yjgA ribosome-associated protein 0.39 MCAODC_11305 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 87
Escherichia coli ECRC100 0.33 OKFHMN_11930 yjgA ribosome-associated protein 0.39 OKFHMN_20780 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.76 38
Escherichia coli ECRC98 0.33 JDDGAC_15570 yjgA ribosome-associated protein 0.39 JDDGAC_24445 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 86
Escherichia coli BL21 0.33 ECD_04102 ribosome-associated UPF0307 family protein 0.39 ECD_02540 multidrug efflux system low > 61
Escherichia coli Nissle 1917 0.33 ECOLIN_RS24565 ribosome biogenesis factor YjgA 0.39 ECOLIN_RS14965 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 55
Escherichia coli ECRC99 0.33 KEDOAH_16225 yjgA ribosome-associated protein 0.39 KEDOAH_07355 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Escherichia coli ECOR27 0.33 NOLOHH_04190 yjgA ribosome-associated protein 0.39 NOLOHH_12620 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Escherichia coli BW25113 0.33 b4234 yjgA hypothetical protein (NCBI) 0.39 b2685 emrA multidrug efflux system (NCBI) low > 76
Escherichia coli ECRC62 0.33 BNILDI_07320 yjgA ribosome-associated protein 0.39 BNILDI_11180 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Escherichia coli ECRC102 0.33 NIAGMN_09780 yjgA ribosome-associated protein 0.39 NIAGMN_18550 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03801 hypothetical protein 0.39 OHPLBJKB_01048 Multidrug export protein EmrA low > 73
Klebsiella michiganensis M5al 0.32 BWI76_RS02845 hypothetical protein 0.38 BWI76_RS22095 multidrug export protein EmrA — —
Lysobacter sp. OAE881 0.32 ABIE51_RS06800 ribosome biogenesis factor YjgA 0.50 ABIE51_RS07710 efflux RND transporter periplasmic adaptor subunit low > 62
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_10270 DUF615 domain-containing protein 0.57 OKGIIK_14285 Hemolysin D low > 52
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS21710 ribosome biogenesis factor YjgA 0.57 ABZR86_RS14770 HlyD family efflux transporter periplasmic adaptor subunit low > 74
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS03385 DUF615 domain-containing protein 0.57 LRK54_RS07785 HlyD family efflux transporter periplasmic adaptor subunit — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS03135 ribosome biogenesis factor YjgA 0.57 LRK55_RS07515 HlyD family efflux transporter periplasmic adaptor subunit — —
Castellaniella sp019104865 MT123 0.27 ABCV34_RS10615 ribosome biogenesis factor YjgA 0.41 ABCV34_RS05945 HlyD family efflux transporter periplasmic adaptor subunit low > 48
Shewanella sp. ANA-3 0.24 Shewana3_3632 hypothetical protein (RefSeq) 0.21 Shewana3_2225 secretion protein HlyD family protein (RefSeq) low > 73
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_1335 hypothetical protein (RefSeq) 0.23 DvMF_1100 secretion protein HlyD family protein (RefSeq) low > 51
Acinetobacter radioresistens SK82 0.19 MPMX26_00549 hypothetical protein 0.32 MPMX26_02395 putative multidrug resistance protein EmrK low > 36

Not shown: 11 genomes with orthologs for Pf1N1B4_1091 only; 17 genomes with orthologs for Pf1N1B4_4001 only