Conservation of cofitness between Pf1N1B4_2354 and Pf1N1B4_3507 in Pseudomonas fluorescens FW300-N1B4

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_2354 twitching motility protein PilH 1.0 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.37 16
Pseudomonas fluorescens GW456-L13 1.00 PfGW456L13_1023 twitching motility protein PilH 0.89 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 low > 87
Pseudomonas sp. RS175 0.99 PFR28_04230 Response regulator PleD 0.88 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 88
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_08100 chemotaxis protein CheY 0.87 AO353_02715 23S rRNA methyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_13485 chemotaxis protein CheY 0.89 AO356_19055 23S rRNA methyltransferase 0.25 63
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_4614 twitching motility protein PilH 0.89 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 low > 103
Pseudomonas sp. S08-1 0.93 OH686_10905 twitching motility protein PilH 0.73 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA low > 80
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_0489 Response regulator receiver 0.75 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_0489 Response regulator receiver 0.75 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS28310 response regulator 0.86 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 109
Pseudomonas stutzeri RCH2 0.93 Psest_0298 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.68 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA low > 67
Pseudomonas fluorescens SBW25 0.93 PFLU_RS28310 response regulator 0.86 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 109
Pseudomonas simiae WCS417 0.91 PS417_26665 chemotaxis protein CheY 0.86 PS417_20155 23S rRNA methyltransferase — —
Pseudomonas putida KT2440 0.82 PP_4991 Protein PilH 0.69 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Marinobacter adhaerens HP15 0.78 HP15_3514 response regulator receiver domain protein (CheY) 0.39 HP15_790 23S rRNA 5-methyluridine methyltransferase low > 73
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0187 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.38 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA low > 40
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS05945 twitching motility response regulator PilH 0.35 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 74
Acinetobacter radioresistens SK82 0.68 MPMX26_02512 Response regulator PleD 0.38 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_05915 pilH twitching motility response regulator PilH 0.33 OKGIIK_07840 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 52
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS00975 twitching motility response regulator PilH 0.34 LRK54_RS17000 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 59
Rhodanobacter denitrificans MT42 0.67 LRK55_RS00750 twitching motility response regulator PilH 0.34 LRK55_RS16715 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 63
Lysobacter sp. OAE881 0.64 ABIE51_RS08955 twitching motility response regulator PilH 0.33 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 62
Dechlorosoma suillum PS 0.61 Dsui_0659 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.31 Dsui_1981 23S rRNA (uracil-5-)-methyltransferase RumA — —
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.3956.1 twitching motility protein PilH 0.35 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) — —
Variovorax sp. SCN45 0.53 GFF2152 twitching motility protein PilH 0.29 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF643 twitching motility protein PilH 0.29 GFF3883 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) low > 90
Ralstonia solanacearum PSI07 0.47 RPSI07_RS20675 response regulator 0.29 RPSI07_RS18130 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 81
Ralstonia solanacearum GMI1000 0.47 RS_RS03365 response regulator 0.29 RS_RS06055 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS00985 response regulator 0.29 UW163_RS12710 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS12580 response regulator 0.29 RALBFv3_RS15245 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 76
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS04250 chemotaxis protein CheY 0.30 RR42_RS13170 23S rRNA methyltransferase low > 128
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS08580 response regulator 0.30 ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 80
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0856 pilH/rre7 response regulator receiver domain protein (CheY-like) 0.18 Synpcc7942_0241 rumA 23S rRNA (uracil-5-)-methyltransferase RumA low > 38

Not shown: 1 genomes with orthologs for Pf1N1B4_2354 only; 65 genomes with orthologs for Pf1N1B4_3507 only