Conservation of cofitness between PP_5348 and PP_4984 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5348 Transcriptional regulator, LysR family 1.0 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.64 4
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_10035 LysR family transcriptional regulator 0.90 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.72 26
Pseudomonas sp. RS175 0.86 PFR28_04519 HTH-type transcriptional activator CmpR 0.89 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.32 23
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_12015 LysR family transcriptional regulator 0.89 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.54 55
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 0.89 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.54 60
Pseudomonas fluorescens SBW25 0.84 PFLU_RS29885 LysR family transcriptional regulator 0.89 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Pseudomonas simiae WCS417 0.84 PS417_28220 LysR family transcriptional regulator 0.89 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS29885 LysR family transcriptional regulator 0.89 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.59 4
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_727 LysR family transcriptional regulator PA5437 0.90 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.64 31
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 0.89 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.46 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_5062 transcriptional regulator, LysR family 0.91 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_5062 transcriptional regulator, LysR family 0.91 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme low > 86
Pseudomonas stutzeri RCH2 0.74 Psest_4086 Transcriptional regulator 0.85 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.66 5
Pseudomonas sp. S08-1 0.71 OH686_13195 Transcriptional regulator, LysR family 0.84 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 80
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_1310 cmpR ndhF3 operon transcriptional regulator 0.33 Synpcc7942_0031 bioA aminotransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_03013 transcriptional regulator, LysR family 0.47 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 103
Paraburkholderia graminis OAS925 0.34 ABIE53_005077 DNA-binding transcriptional LysR family regulator 0.49 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 113
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS29890 LysR family transcriptional regulator 0.48 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 109
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS20425 LysR family transcriptional regulator 0.47 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS31340 transcriptional regulator 0.41 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 128
Shewanella loihica PV-4 0.33 Shew_1245 LysR family transcriptional regulator (RefSeq) 0.29 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2192 Cys regulon transcriptional activator CysB 0.48 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 90
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3174 RuBisCO operon transcriptional regulator 0.46 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 79
Variovorax sp. OAS795 0.31 ABID97_RS24450 LysR family transcriptional regulator 0.44 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 91
Dechlorosoma suillum PS 0.30 Dsui_2869 transcriptional regulator 0.47 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 51
Rhodopseudomonas palustris CGA009 0.25 TX73_007990 LysR family transcriptional regulator 0.32 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Shewanella amazonensis SB2B 0.24 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) 0.26 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.23 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) 0.29 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.22 Shewana3_0835 LysR family transcriptional regulator (RefSeq) 0.28 Shewana3_2520 aminotransferase (RefSeq) — —

Not shown: 3 genomes with orthologs for PP_5348 only; 64 genomes with orthologs for PP_4984 only