Conservation of cofitness between PP_3527 and PP_4922 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3527 Transcriptional regulator, TetR family 1.0 PP_4922 Phosphomethylpyrimidine synthase 0.32 12
Pseudomonas sp. RS175 0.69 PFR28_03812 HTH-type transcriptional repressor NicS 0.92 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_06180 TetR family transcriptional regulator 0.92 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_15585 TetR family transcriptional regulator 0.92 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5059 Transcriptional regulator, TetR family 0.92 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2748 Transcriptional regulator, TetR family 0.91 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1426 Transcriptional regulator, TetR family 0.92 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas simiae WCS417 0.67 PS417_24440 TetR family transcriptional regulator 0.91 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS26365 TetR/AcrR family transcriptional regulator 0.92 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS26365 TetR/AcrR family transcriptional regulator 0.92 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_2131 transcriptional regulator, TetR family 0.92 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_2131 transcriptional regulator, TetR family 0.92 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Azospirillum sp. SherDot2 0.49 MPMX19_03530 HTH-type transcriptional repressor NicS 0.64 MPMX19_00336 Phosphomethylpyrimidine synthase low > 112
Sinorhizobium meliloti 1021 0.48 SM_b20033 transcriptional regulator 0.65 SM_b20615 thiamine biosynthesis protein ThiC low > 103
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS22695 TetR family transcriptional regulator 0.77 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Paraburkholderia graminis OAS925 0.47 ABIE53_004073 AcrR family transcriptional regulator 0.77 ABIE53_002857 phosphomethylpyrimidine synthase 0.25 100
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS13120 TetR family transcriptional regulator 0.78 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC low > 153
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_03218 transcriptional regulator, TetR family 0.77 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Ralstonia solanacearum GMI1000 0.45 RS_RS23855 TetR/AcrR family transcriptional regulator 0.74 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS06190 TetR/AcrR family transcriptional regulator 0.74 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS17460 TetR/AcrR family transcriptional regulator 0.74 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS21690 TetR/AcrR family transcriptional regulator 0.74 UW163_RS03640 phosphomethylpyrimidine synthase ThiC
Castellaniella sp019104865 MT123 0.43 ABCV34_RS11575 TetR/AcrR family transcriptional regulator 0.75 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF5228 Transcriptional regulator, TetR family 0.68 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1230 Transcriptional regulator, TetR family 0.67 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.45 10
Pantoea sp. MT58 0.39 IAI47_07270 TetR family transcriptional regulator 0.73 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Agrobacterium fabrum C58 0.38 Atu4530 TetR family transcriptional regulator 0.65 Atu2569 thiamine biosynthesis protein low > 89
Serratia liquefaciens MT49 0.37 IAI46_12895 TetR family transcriptional regulator 0.73 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Klebsiella michiganensis M5al 0.35 BWI76_RS16950 TetR family transcriptional regulator 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Enterobacter sp. TBS_079 0.34 MPMX20_00655 HTH-type transcriptional repressor NicS 0.72 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Rahnella sp. WP5 0.33 EX31_RS06045 TetR family transcriptional regulator 0.73 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Enterobacter asburiae PDN3 0.33 EX28DRAFT_3565 transcriptional regulator, TetR family 0.72 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Escherichia coli Nissle 1917 0.28 ECOLIN_RS24435 TetR/AcrR family transcriptional regulator 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC low > 52
Escherichia fergusonii Becca 0.28 EFB2_04323 HTH-type transcriptional repressor NicS 0.72 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli ECOR38 0.27 HEPCGN_10290 acrR TetR/AcrR family transcriptional regulator 0.72 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03830 HTH-type transcriptional repressor NicS 0.72 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Escherichia coli ECRC62 0.25 BNILDI_07175 TetR/AcrR family transcriptional regulator 0.72 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC

Not shown: 0 genomes with orthologs for PP_3527 only; 57 genomes with orthologs for PP_4922 only