Conservation of cofitness between PP_5337 and PP_4892 in Pseudomonas putida KT2440

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5337 LysR family transcriptional regulator 1.0 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.43 7
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.75 PFLU_RS02580 FtsH protease activity modulator HflK 0.64 20
Pseudomonas simiae WCS417 0.91 PS417_28125 LysR family transcriptional regulator 0.74 PS417_02500 membrane protein — —
Pseudomonas fluorescens SBW25 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.75 PFLU_RS02580 FtsH protease activity modulator HflK 0.66 102
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_09945 LysR family transcriptional regulator 0.77 AO353_13155 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_743 Transcriptional regulator 0.74 PfGW456L13_152 HflK protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_5050 transcriptional regulator, LysR family 0.72 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_5050 transcriptional regulator, LysR family 0.72 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_2026 Transcriptional regulator 0.75 Pf1N1B4_1410 HflK protein — —
Pseudomonas sp. RS175 0.90 PFR28_04497 HTH-type transcriptional regulator YjiE 0.76 PFR28_05123 Modulator of FtsH protease HflK 0.50 6
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_11085 LysR family transcriptional regulator 0.74 AO356_08645 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_4084 Transcriptional regulator 0.73 Pf6N2E2_3612 HflK protein low > 103
Pseudomonas stutzeri RCH2 0.80 Psest_4073 Transcriptional regulator 0.66 Psest_0685 HflK protein — —
Pseudomonas sp. S08-1 0.78 OH686_13320 LysR-family transcriptional regulator 0.64 OH686_09460 HflK protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF518 Transcriptional regulator 0.33 GFF4856 HflK protein low > 90
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1953 Transcriptional regulator 0.31 Ac3H11_1801 HflK protein low > 79
Variovorax sp. OAS795 0.34 ABID97_RS05925 LysR substrate-binding domain-containing protein 0.31 ABID97_RS14260 FtsH protease activity modulator HflK low > 91
Variovorax sp. SCN45 0.33 GFF4595 Transcriptional regulator 0.31 GFF1002 HflK protein low > 127
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS07510 LysR family transcriptional regulator 0.31 ABZR87_RS10950 FtsH protease activity modulator HflK low > 80
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS33805 LysR substrate-binding domain-containing protein 0.32 QEN71_RS06010 FtsH protease activity modulator HflK low > 153
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS11545 LysR family transcriptional regulator 0.32 RALBFv3_RS15310 FtsH protease activity modulator HflK low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS02040 LysR family transcriptional regulator 0.32 UW163_RS12775 FtsH protease activity modulator HflK — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS21665 LysR family transcriptional regulator 0.32 RPSI07_RS18065 FtsH protease activity modulator HflK low > 81
Ralstonia solanacearum GMI1000 0.32 RS_RS02375 LysR family transcriptional regulator 0.30 RS_RS06120 FtsH protease activity modulator HflK low > 80
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04272 transcriptional regulator, LysR family 0.29 H281DRAFT_00523 protease FtsH subunit HflK — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS16710 LysR family transcriptional regulator 0.29 BPHYT_RS12545 membrane protein — —
Paraburkholderia graminis OAS925 0.32 ABIE53_003512 DNA-binding transcriptional LysR family regulator 0.30 ABIE53_002735 membrane protease subunit HflK low > 113
Dickeya dianthicola ME23 0.31 DZA65_RS07765 hypochlorite stress DNA-binding transcriptional regulator HypT 0.34 DZA65_RS19670 FtsH protease activity modulator HflK low > 75
Escherichia coli Nissle 1917 0.31 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT 0.33 ECOLIN_RS24240 FtsH protease activity modulator HflK — —
Escherichia coli ECOR38 0.31 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.33 HEPCGN_10475 hflK FtsH protease activity modulator HflK low > 85
Escherichia coli ECOR27 0.31 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.33 NOLOHH_04510 hflK FtsH protease activity modulator HflK — —
Escherichia fergusonii Becca 0.31 EFB2_04117 HTH-type transcriptional regulator YjiE 0.33 EFB2_04361 Modulator of FtsH protease HflK low > 86
Escherichia coli BL21 0.31 ECD_04196 hypochlorite-responsive transcription factor 0.33 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor low > 60
Escherichia coli BW25113 0.31 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) 0.33 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli ECRC62 0.31 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT 0.33 BNILDI_06980 hflK FtsH protease activity modulator HflK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE 0.33 OHPLBJKB_03868 Modulator of FtsH protease HflK low > 73
Dickeya dianthicola 67-19 0.31 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT 0.33 HGI48_RS18535 FtsH protease activity modulator HflK low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF984 LysR family transcriptional regulator QseA 0.32 GFF827 HflK protein low > 78
Dickeya dadantii 3937 0.30 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT 0.33 DDA3937_RS18600 FtsH protease activity modulator HflK low > 74
Pectobacterium carotovorum WPP14 0.29 HER17_RS14225 hypochlorite stress DNA-binding transcriptional regulator HypT 0.31 HER17_RS02595 FtsH protease activity modulator HflK low > 75
Rahnella sp. WP5 0.28 EX31_RS05520 LysR family transcriptional regulator 0.32 EX31_RS08810 FtsH protease activity modulator HflK low > 89
Klebsiella michiganensis M5al 0.28 BWI76_RS17610 LysR family transcriptional regulator 0.32 BWI76_RS02545 protease modulator HflK low > 92
Marinobacter adhaerens HP15 0.26 HP15_205 protein containing bacterial regulatory protein, LysR domain 0.43 HP15_2497 HflK low > 73
Sinorhizobium meliloti 1021 0.25 SMa0097 LysR family transcriptional regulator 0.26 SMc01441 membrane bound protease low > 103
Bosea sp. OAE506 0.22 ABIE41_RS16420 LysR family transcriptional regulator 0.26 ABIE41_RS12850 FtsH protease activity modulator HflK low > 77
Azospirillum sp. SherDot2 0.22 MPMX19_05675 HTH-type transcriptional regulator YjiE 0.27 MPMX19_01251 Modulator of FtsH protease HflK — —

Not shown: 7 genomes with orthologs for PP_5337 only; 28 genomes with orthologs for PP_4892 only