Conservation of cofitness between PP_4989 and PP_4546 in Pseudomonas putida KT2440

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4989 Protein PilJ 1.0 PP_4546 ATP-dependent helicase HrpA 0.32 4
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_13495 chemotaxis protein 0.85 AO356_04280 ATP-dependent RNA helicase HrpA low > 104
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_4616 type IV pilus biogenesis protein PilJ 0.85 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 103
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_08090 chemotaxis protein 0.85 AO353_18225 ATP-dependent RNA helicase HrpA low > 101
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1025 type IV pilus biogenesis protein PilJ 0.85 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas fluorescens SBW25 0.78 PFLU_RS28300 chemotaxis protein 0.85 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS28300 chemotaxis protein 0.85 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas simiae WCS417 0.78 PS417_26655 chemotaxis protein 0.85 PS417_20575 ATP-dependent helicase HrpA low > 88
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2357 type IV pilus biogenesis protein PilJ 0.85 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas sp. RS175 0.77 PFR28_04228 hypothetical protein 0.85 PFR28_00739 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0491 chemotaxis sensory transducer 0.85 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0491 chemotaxis sensory transducer 0.85 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas sp. S08-1 0.72 OH686_10895 type IV pilus biogenesis protein PilJ 0.80 OH686_05730 RNA helicase HrpA low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0300 Methyl-accepting chemotaxis protein 0.78 Psest_1339 ATP-dependent helicase HrpA low > 67
Marinobacter adhaerens HP15 0.55 HP15_3516 methyl-accepting chemotaxis sensory transducer 0.48 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type low > 73
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0185 Methyl-accepting chemotaxis protein 0.39 B158DRAFT_1779 ATP-dependent helicase HrpA low > 40
Acinetobacter radioresistens SK82 0.40 MPMX26_02510 hypothetical protein 0.37 MPMX26_02008 hypothetical protein low > 36
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_11055 chemotaxis protein 0.35 OKGIIK_02155 hrpA ATP-dependent RNA helicase HrpA low > 52
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS04180 methyl-accepting chemotaxis protein 0.36 LRK54_RS12715 ATP-dependent RNA helicase HrpA low > 59
Rhodanobacter denitrificans MT42 0.40 LRK55_RS03950 methyl-accepting chemotaxis protein 0.36 LRK55_RS12420 ATP-dependent RNA helicase HrpA low > 63
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10350 methyl-accepting chemotaxis protein 0.39 ABZR86_RS19720 ATP-dependent RNA helicase HrpA low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS05230 methyl-accepting chemotaxis protein 0.37 ABIE51_RS05155 ATP-dependent RNA helicase HrpA low > 62
Dechlorosoma suillum PS 0.35 Dsui_0657 methyl-accepting chemotaxis protein 0.41 Dsui_1373 ATP-dependent helicase HrpA low > 51
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS12590 chemotaxis protein 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA low > 76
Ralstonia solanacearum UW163 0.31 UW163_RS00975 chemotaxis protein 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA — —
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS08590 methyl-accepting chemotaxis protein 0.41 ABZR87_RS11020 ATP-dependent RNA helicase HrpA low > 80
Ralstonia solanacearum GMI1000 0.30 RS_RS03375 chemotaxis protein 0.41 RS_RS06270 ATP-dependent RNA helicase HrpA low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS20665 chemotaxis protein 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA low > 81
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS04260 chemotaxis protein 0.42 RR42_RS13030 ATP-dependent helicase low > 128
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3986 twitching motility protein PilJ 0.38 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF645 twitching motility protein PilJ 0.38 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 90
Variovorax sp. SCN45 0.27 GFF2154 twitching motility protein PilJ 0.38 GFF247 ATP-dependent helicase HrpA low > 127
Variovorax sp. OAS795 0.26 ABID97_RS24690 methyl-accepting chemotaxis protein 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA low > 91
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS19170 chemotaxis protein 0.39 HSERO_RS17315 ATP-dependent helicase low > 78

Not shown: 1 genomes with orthologs for PP_4989 only; 35 genomes with orthologs for PP_4546 only