Conservation of cofitness between PP_4034 and PP_4050 in Pseudomonas putida KT2440

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4034 N-carbamoyl-beta-alanine amidohydrolase/allantoine amidohydrolase 2 1.0 PP_4050 glycogen synthase 0.18 4
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_500 Beta-ureidopropionase (EC 3.5.1.6) 0.79 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 103
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_23105 Beta-ureidopropionase (EC 3.5.1.6) (from data) 0.79 AO356_26025 glycogen synthase low > 104
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4519 Beta-ureidopropionase (EC 3.5.1.6) 0.76 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_3503 Beta-ureidopropionase (EC 3.5.1.6) (from data) 0.76 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 87
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_26560 Beta-ureidopropionase (EC 3.5.1.6) (from data) 0.75 AO353_23775 glycogen synthase low > 101
Pseudomonas simiae WCS417 0.79 PS417_17310 allantoate amidohydrolase 0.78 PS417_14480 glycogen synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS19240 Zn-dependent hydrolase 0.78 PFLU_RS16410 glycogen synthase GlgA low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS19240 Zn-dependent hydrolase 0.78 PFLU_RS16410 glycogen synthase GlgA low > 109
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS23170 Zn-dependent hydrolase 0.28 ABZR87_RS17230 glycogen synthase GlgA low > 80
Variovorax sp. OAS795 0.57 ABID97_RS09360 Zn-dependent hydrolase 0.32 ABID97_RS04535 glycogen synthase GlgA low > 91
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_06393 N-carbamoyl-L-amino-acid hydrolase 0.32 H281DRAFT_04861 starch synthase low > 103
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS23275 allantoate amidohydrolase 0.27 HSERO_RS12515 glycogen synthase low > 78
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS05385 Zn-dependent hydrolase 0.31 QEN71_RS23430 glycogen synthase GlgA low > 153
Ralstonia solanacearum PSI07 0.54 RPSI07_RS18000 Zn-dependent hydrolase 0.26 RPSI07_RS00900 glycogen synthase GlgA low > 81
Azospirillum brasilense Sp245 0.54 AZOBR_RS23040 allantoate amidohydrolase 0.34 AZOBR_RS00855 glycogen synthase
Klebsiella michiganensis M5al 0.53 BWI76_RS07550 Zn-dependent hydrolase 0.33 BWI76_RS26200 starch synthase low > 92
Serratia liquefaciens MT49 0.49 IAI46_13115 Zn-dependent hydrolase 0.33 IAI46_23925 glycogen synthase GlgA low > 86
Rhodopseudomonas palustris CGA009 0.45 TX73_008975 Zn-dependent hydrolase 0.31 TX73_001985 glycogen synthase GlgA low > 86
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1072 amidase, hydantoinase/carbamoylase family 0.34 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type low > 76
Agrobacterium fabrum C58 0.43 Atu2385 N-carbamoyl-beta-alanine amidohydrolase 0.32 Atu4075 glycogen synthase low > 89
Sinorhizobium meliloti 1021 0.43 SMc01820 Beta-ureidopropionase (EC 3.5.1.6) (from data) 0.34 SMc03924 glycogen synthase low > 103
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS05630 Zn-dependent hydrolase 0.25 RALBFv3_RS22290 glycogen synthase GlgA low > 76
Ralstonia solanacearum UW163 0.32 UW163_RS07995 Zn-dependent hydrolase 0.25 UW163_RS22835 glycogen synthase GlgA
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_3056 Amidase, hydantoinase/carbamoylase 0.71 Psyr_2992 Starch (bacterial glycogen) synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_3056 Amidase, hydantoinase/carbamoylase 0.71 Psyr_2992 Starch (bacterial glycogen) synthase low > 86
Rahnella sp. WP5 0.25 EX31_RS21095 allantoate amidohydrolase 0.34 EX31_RS05010 glycogen synthase GlgA low > 89
Alteromonas macleodii MIT1002 0.25 MIT1002_01591 N-carbamoyl-L-amino acid hydrolase 0.21 MIT1002_00235 Glycogen synthase low > 70
Pectobacterium carotovorum WPP14 0.24 HER17_RS04565 allantoate amidohydrolase 0.33 HER17_RS01500 glycogen synthase GlgA low > 75
Dickeya dianthicola 67-19 0.24 HGI48_RS16705 allantoate amidohydrolase 0.33 HGI48_RS19840 glycogen synthase GlgA 0.76 23
Dickeya dadantii 3937 0.24 DDA3937_RS16635 allantoate amidohydrolase 0.33 DDA3937_RS19730 glycogen synthase GlgA low > 74
Dickeya dianthicola ME23 0.24 DZA65_RS17795 allantoate amidohydrolase 0.33 DZA65_RS20915 glycogen synthase GlgA low > 75
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.364.1 hypothetical protein 0.48 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 74
Enterobacter sp. TBS_079 0.22 MPMX20_01673 N-carbamoyl-L-amino acid hydrolase 0.33 MPMX20_04311 Glycogen synthase low > 85
Pantoea sp. MT58 0.22 IAI47_15245 allantoate amidohydrolase 0.32 IAI47_01695 glycogen synthase GlgA low > 76
Escherichia fergusonii Becca 0.21 EFB2_03546 Allantoate amidohydrolase 0.33 EFB2_00390 Glycogen synthase low > 86
Escherichia coli ECRC62 0.21 BNILDI_22290 allC allantoate deiminase 0.33 BNILDI_02825 glgA glycogen synthase GlgA low > 75
Escherichia coli Nissle 1917 0.21 ECOLIN_RS02995 allantoate deiminase 0.33 ECOLIN_RS19625 glycogen synthase GlgA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03165 Allantoate amidohydrolase 0.33 OHPLBJKB_00272 Glycogen synthase low > 73
Escherichia coli BL21 0.21 ECD_00466 allantoate amidohydrolase 0.33 ECD_03281 glycogen synthase low > 61
Escherichia coli ECOR27 0.21 NOLOHH_00860 allC allantoate deiminase 0.33 NOLOHH_08690 glgA glycogen synthase GlgA low > 75
Escherichia coli BW25113 0.21 b0516 allC N-carbamoyl-L-amino acid amidohydrolase (NCBI) 0.33 b3429 glgA glycogen synthase (NCBI) low > 76
Escherichia coli ECOR38 0.21 HEPCGN_06515 allC allantoate deiminase 0.33 HEPCGN_15715 glgA glycogen synthase GlgA low > 87
Escherichia coli ECRC98 0.21 JDDGAC_11520 allC allantoate deiminase 0.33 JDDGAC_20530 glgA glycogen synthase GlgA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4432 Allantoate amidohydrolase (EC 3.5.3.9) 0.34 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 78
Escherichia coli ECRC102 0.21 NIAGMN_05925 allC allantoate deiminase 0.33 NIAGMN_14670 glgA glycogen synthase GlgA
Escherichia coli ECRC101 0.21 MCAODC_27090 allC allantoate deiminase 0.33 MCAODC_07430 glgA glycogen synthase GlgA low > 87
Escherichia coli ECRC99 0.21 KEDOAH_20095 allC allantoate deiminase 0.33 KEDOAH_11240 glgA glycogen synthase GlgA
Escherichia coli ECRC100 0.21 OKFHMN_07870 allC allantoate deiminase 0.33 OKFHMN_16900 glgA glycogen synthase GlgA low > 80

Not shown: 8 genomes with orthologs for PP_4034 only; 24 genomes with orthologs for PP_4050 only