Conservation of cofitness between PP_2903 and PP_2137 in Pseudomonas putida KT2440

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 1.0 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.30 10
Pseudomonas sp. RS175 0.81 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 0.96 PFR28_01111 3-ketoacyl-CoA thiolase low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.93 Pf6N2E2_2289 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_01015 peptidylprolyl isomerase 0.95 AO356_02325 3-ketoacyl-CoA thiolase low > 104
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.95 Psyr_3289 3-ketoacyl-CoA thiolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.95 Psyr_3289 3-ketoacyl-CoA thiolase low > 86
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.93 Pf1N1B4_3904 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.95 PfGW456L13_4040 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_27825 peptidylprolyl isomerase 0.95 AO353_00505 3-ketoacyl-CoA thiolase low > 101
Pseudomonas fluorescens SBW25 0.76 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA low > 109
Pseudomonas simiae WCS417 0.75 PS417_16900 peptidylprolyl isomerase 0.94 PS417_07580 3-ketoacyl-CoA thiolase — —
Pseudomonas stutzeri RCH2 0.70 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.90 Psest_2653 fatty oxidation complex, beta subunit FadA — —
Rahnella sp. WP5 0.68 EX31_RS22640 peptidylprolyl isomerase B 0.64 EX31_RS14570 acetyl-CoA C-acyltransferase FadA — —
Marinobacter adhaerens HP15 0.68 HP15_2190 peptidyl-prolyl cis-trans isomerase B 0.72 HP15_1513 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) low > 73
Pseudomonas sp. S08-1 0.68 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB 0.93 OH686_21930 acetyl-CoA C-acyltransferase FadA low > 80
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS06335 cyclophilin 0.35 RR42_RS02515 acetyl-CoA acetyltransferase — —
Serratia liquefaciens MT49 0.65 IAI46_05385 peptidylprolyl isomerase B 0.65 IAI46_01125 acetyl-CoA C-acyltransferase FadA low > 86
Pantoea sp. MT58 0.65 IAI47_14340 peptidylprolyl isomerase B 0.65 IAI47_18235 acetyl-CoA C-acyltransferase FadA — —
Variovorax sp. SCN45 0.65 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.38 GFF2768 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.64 GFF272 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Escherichia coli ECRC102 0.64 NIAGMN_05880 ppiB peptidylprolyl isomerase B 0.63 NIAGMN_12005 fadA acetyl-CoA C-acyltransferase FadA — —
Acinetobacter radioresistens SK82 0.64 MPMX26_01727 Peptidyl-prolyl cis-trans isomerase cyp18 0.64 MPMX26_00225 3-ketoacyl-CoA thiolase low > 36
Escherichia coli ECRC101 0.64 MCAODC_27045 ppiB peptidylprolyl isomerase B 0.63 MCAODC_04755 fadA acetyl-CoA C-acyltransferase FadA — —
Enterobacter sp. TBS_079 0.64 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B 0.64 MPMX20_04437 3-ketoacyl-CoA thiolase low > 85
Escherichia coli Nissle 1917 0.64 ECOLIN_RS03045 peptidylprolyl isomerase B 0.64 ECOLIN_RS22165 acetyl-CoA C-acyltransferase FadA — —
Escherichia coli ECOR38 0.64 HEPCGN_06465 ppiB peptidylprolyl isomerase B 0.63 HEPCGN_12880 fadA acetyl-CoA C-acyltransferase FadA — —
Escherichia fergusonii Becca 0.64 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B 0.63 EFB2_04772 3-ketoacyl-CoA thiolase FadA — —
Escherichia coli ECRC62 0.64 BNILDI_22245 ppiB peptidylprolyl isomerase B 0.63 BNILDI_05150 fadA acetyl-CoA C-acyltransferase FadA — —
Escherichia coli ECRC98 0.64 JDDGAC_11475 ppiB peptidylprolyl isomerase B 0.63 JDDGAC_17875 fadA acetyl-CoA C-acyltransferase FadA — —
Klebsiella michiganensis M5al 0.64 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase 0.63 BWI76_RS01360 acetyl-CoA C-acyltransferase FadA — —
Escherichia coli ECRC99 0.64 KEDOAH_20145 ppiB peptidylprolyl isomerase B 0.63 KEDOAH_13900 fadA acetyl-CoA C-acyltransferase FadA — —
Escherichia coli ECRC101 0.64 OKFHMN_07825 ppiB peptidylprolyl isomerase B 0.63 OKFHMN_14250 fadA acetyl-CoA C-acyltransferase FadA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B 0.63 OHPLBJKB_04208 3-ketoacyl-CoA thiolase FadA — —
Escherichia coli BL21 0.64 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.63 ECD_03736 3-ketoacyl-CoA thiolase (thiolase I) — —
Escherichia coli BW25113 0.64 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) 0.63 b3845 fadA acetyl-CoA acetyltransferase (NCBI) — —
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1021 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.67 B158DRAFT_0355 fatty oxidation complex, beta subunit FadA low > 40
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.64 EX28DRAFT_4509 fatty oxidation complex, beta subunit FadA — —
Escherichia coli ECOR27 0.64 NOLOHH_00815 ppiB peptidylprolyl isomerase B 0.63 NOLOHH_06380 fadA acetyl-CoA C-acyltransferase FadA — —
Variovorax sp. OAS795 0.64 ABID97_RS17860 peptidylprolyl isomerase 0.38 ABID97_RS20240 thiolase family protein low > 91
Pectobacterium carotovorum WPP14 0.62 HER17_RS06485 peptidylprolyl isomerase B 0.64 HER17_RS20555 acetyl-CoA C-acyltransferase FadA — —
Dickeya dianthicola ME23 0.62 DZA65_RS15980 peptidylprolyl isomerase B 0.60 DZA65_RS01030 acetyl-CoA C-acyltransferase FadA — —
Dickeya dadantii 3937 0.62 DDA3937_RS15095 peptidylprolyl isomerase B 0.60 DDA3937_RS20255 acetyl-CoA C-acyltransferase FadA — —
Shewanella sp. ANA-3 0.62 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) 0.65 Shewana3_0023 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) — —
Shewanella oneidensis MR-1 0.62 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) 0.65 SO0020 fadA fatty oxidation complex, beta subunit (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.61 HGI48_RS15175 peptidylprolyl isomerase B 0.60 HGI48_RS00970 acetyl-CoA C-acyltransferase FadA low > 71
Shewanella loihica PV-4 0.61 Shew_2512 peptidylprolyl isomerase (RefSeq) 0.66 Shew_0018 fadA 3-ketoacyl-CoA thiolase (RefSeq) — —
Alteromonas macleodii MIT1002 0.61 MIT1002_02501 Peptidyl-prolyl cis-trans isomerase B 0.66 MIT1002_00574 3-ketoacyl-CoA thiolase low > 70
Shewanella amazonensis SB2B 0.59 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) 0.66 Sama_0031 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_09260 peptidylprolyl isomerase 0.62 CSW01_13975 acetyl-CoA C-acyltransferase FadA low > 62

Not shown: 21 genomes with orthologs for PP_2903 only; 3 genomes with orthologs for PP_2137 only