Conservation of cofitness between PP_5146 and PP_1805 in Pseudomonas putida KT2440

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5146 RNA pyrophosphohydrolase 1.0 PP_1805 Polysaccharide biosynthesis protein 0.40 20
Pseudomonas fluorescens SBW25 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.76 PFLU_RS08190 polysaccharide biosynthesis protein 0.85 28
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.76 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas simiae WCS417 0.99 PS417_26990 RNA pyrophosphohydrolase 0.73 PS417_08190 membrane protein low > 88
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_952 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.78 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas sp. RS175 0.98 PFR28_04831 RNA pyrophosphohydrolase 0.75 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 88
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_08470 RNA pyrophosphohydrolase 0.78 AO353_01970 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a 0.98 Psyr_4843 NUDIX hydrolase 0.75 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.45 29
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3941 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.74 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM 0.34 18
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_10345 RNA pyrophosphohydrolase 0.75 AO356_03345 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.98 Psyr_4843 NUDIX hydrolase 0.75 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas sp. S08-1 0.92 OH686_11425 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 0.70 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_3863 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.70 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00342 RNA pyrophosphohydrolase 0.34 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 36
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2905 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.44 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases — —
Dickeya dianthicola ME23 0.70 DZA65_RS05295 RNA pyrophosphohydrolase 0.38 DZA65_RS03625 polysaccharide biosynthesis protein low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS04955 RNA pyrophosphohydrolase 0.38 HGI48_RS03510 polysaccharide biosynthesis protein — —
Dickeya dadantii 3937 0.69 DDA3937_RS04945 RNA pyrophosphohydrolase 0.38 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Shewanella amazonensis SB2B 0.67 Sama_0863 dinucleoside polyphosphate hydrolase (RefSeq) 0.43 Sama_2244 polysaccharide biosynthesis protein (RefSeq) — —
Shewanella oneidensis MR-1 0.66 SO1331 MutT/nudix family protein (NCBI ptt file) 0.43 SO3171 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.65 LRK55_RS08860 RNA pyrophosphohydrolase 0.26 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS09330 RNA pyrophosphohydrolase 0.26 LRK54_RS18060 polysaccharide biosynthesis protein low > 59
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13805 RNA pyrophosphohydrolase 0.26 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase low > 74
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_15860 RNA pyrophosphohydrolase 0.28 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein low > 52
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09820 RNA pyrophosphohydrolase 0.26 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase low > 48
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS01825 RNA pyrophosphohydrolase 0.43 HSERO_RS21110 dTDP-glucose 4,6-dehydratase 0.48 7
Dechlorosoma suillum PS 0.51 Dsui_1325 ADP-ribose pyrophosphatase 0.28 Dsui_0400 putative nucleoside-diphosphate sugar epimerase low > 51
Azospirillum sp. SherDot2 0.34 MPMX19_01945 RNA pyrophosphohydrolase 0.24 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase — —
Rhodospirillum rubrum S1H 0.34 Rru_A1230 NUDIX hydrolase (NCBI) 0.23 Rru_A3656 Polysaccharide biosynthesis protein CapD (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_4001 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.21 Ga0059261_4092 Predicted nucleoside-diphosphate sugar epimerases low > 68
Magnetospirillum magneticum AMB-1 0.31 AMB_RS01525 RNA pyrophosphohydrolase 0.25 AMB_RS00500 polysaccharide biosynthesis protein — —
Bosea sp. OAE506 0.30 ABIE41_RS07545 RNA pyrophosphohydrolase 0.16 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_0092 NUDIX hydrolase (RefSeq) 0.30 Dshi_3857 polysaccharide biosynthesis protein CapD (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.28 TX73_000905 RNA pyrophosphohydrolase 0.19 TX73_020640 nucleoside-diphosphate sugar epimerase/dehydratase low > 86
Sinorhizobium meliloti 1021 0.26 SMc03785 dinucleoside polyphosphate hydrolase 0.19 SM_b21232 nucleotide sugar epimerase dehydratase 0.35 30

Not shown: 32 genomes with orthologs for PP_5146 only; 24 genomes with orthologs for PP_1805 only