Conservation of cofitness between PP_4058 and PP_1778 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4058 1,4-alpha-glucan branching enzyme 1.0 PP_1778 Lipopolysaccharide ABC export system, permease protein 0.39 8
Pseudomonas sp. RS175 0.79 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB 0.36 PFR28_04556 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.40 PfGW456L13_2336 O-antigen export system permease protein RfbD low > 87
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.40 Pf1N1B4_1963 O-antigen export system permease protein RfbD low > 87
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_01245 glycogen branching protein 0.40 AO356_11825 ABC transporter 0.37 19
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.40 Pf6N2E2_4240 O-antigen export system permease protein RfbD low > 103
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_22945 glycogen branching protein 0.40 AO353_10255 ABC transporter low > 101
Pseudomonas simiae WCS417 0.77 PS417_12805 glycogen branching protein 0.20 PS417_20640 sugar ABC transporter permease
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_2491 glycogen branching enzyme 0.77 Psyr_0917 ABC-2 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_2491 glycogen branching enzyme 0.77 Psyr_0917 ABC-2 low > 86
Pseudomonas sp. S08-1 0.68 OH686_01540 1,4-alpha-glucan branching enzyme 0.37 OH686_11970 O-antigen export system permease protein RfbD low > 80
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS33780 glycogen branching protein 0.21 BPHYT_RS21440 sugar ABC transporter permease low > 109
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB 0.23 QEN71_RS25730 ABC transporter permease low > 153
Bosea sp. OAE506 0.59 ABIE41_RS01220 1,4-alpha-glucan branching protein GlgB 0.23 ABIE41_RS03025 ABC transporter permease
Paraburkholderia graminis OAS925 0.59 ABIE53_004826 1,4-alpha-glucan branching enzyme 0.25 ABIE53_001154 lipopolysaccharide transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_06050 1,4-alpha-glucan branching enzyme 0.24 H281DRAFT_04827 lipopolysaccharide transport system permease protein
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.186.1 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.56 Xcc-8004.4513.1 O-antigen export system permease protein RfbD
Azospirillum brasilense Sp245 0.55 AZOBR_RS09455 glycogen branching protein 0.60 AZOBR_RS33925 ABC transporter low > 97
Rhodospirillum rubrum S1H 0.55 Rru_A2576 1,4-alpha-glucan branching enzyme (NCBI) 0.14 Rru_B0027 ABC-2 (NCBI)
Magnetospirillum magneticum AMB-1 0.54 AMB_RS15430 1,4-alpha-glucan branching protein GlgB 0.24 AMB_RS05435 ABC transporter permease
Azospirillum sp. SherDot2 0.54 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB 0.20 MPMX19_06721 hypothetical protein
Escherichia coli BL21 0.53 ECD_03284 1,4-alpha-glucan branching enzyme 0.11 ECD_02828 Polysialic acid transport protein kpsM low > 60
Escherichia coli ECOR38 0.53 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme 0.11 HEPCGN_18100 kpsM Polysialic acid transport protein low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB 0.43 OHPLBJKB_01668 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.53 ECOLIN_RS19640 1,4-alpha-glucan branching enzyme 0.11 ECOLIN_RS17035 ABC transporter permease
Serratia liquefaciens MT49 0.53 IAI46_23940 1,4-alpha-glucan branching protein GlgB 0.19 IAI46_08125 ABC transporter permease
Escherichia fergusonii Becca 0.53 EFB2_00387 1,4-alpha-glucan branching enzyme GlgB 0.11 EFB2_00855 Polysialic acid transport protein KpsM low > 86
Pantoea sp. MT58 0.52 IAI47_01680 1,4-alpha-glucan branching enzyme 0.17 IAI47_07010 ABC transporter permease low > 76
Rahnella sp. WP5 0.52 EX31_RS05025 1,4-alpha-glucan branching enzyme 0.25 EX31_RS11480 ABC transporter permease low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF575 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.10 GFF4626 O-antigen export system permease protein RfbD
Dickeya dadantii 3937 0.51 DDA3937_RS19745 1,4-alpha-glucan branching protein GlgB 0.10 DDA3937_RS18670 ABC transporter permease low > 74
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_1085 glgB glycogen branching enzyme 0.19 Synpcc7942_1126 ABC transporter permease protein low > 38
Bifidobacterium breve UCC2003 0.47 BBR_RS14240 1,4-alpha-glucan branching protein GlgB 0.14 BBR_RS19765 ABC transporter permease
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU2243 glgB 1,4-alpha-glucan branching enzyme (TIGR) 0.22 DVUA0077 ABC transporter, permease protein (TIGR)
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_0840 glycogen branching enzyme (RefSeq) 0.18 DvMF_2701 ABC-2 type transporter (RefSeq)
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS02145 1,4-alpha-glucan branching enzyme 0.18 CA265_RS01800 ABC transporter permease low > 88
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS17315 alpha amylase C-terminal domain-containing protein 0.19 ABI39_RS13680 ABC transporter permease low > 72

Not shown: 41 genomes with orthologs for PP_4058 only; 9 genomes with orthologs for PP_1778 only