Conservation of cofitness between PP_4308 and PP_1352 in Pseudomonas putida KT2440

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4308 Transcriptional regulator, AsnC family 1.0 PP_1352 UPF0234 protein PP_1352 0.13 10
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2800 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.83 PfGW456L13_1840 FIG001943: hypothetical protein YajQ
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_5687 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.84 Pf1N1B4_650 FIG001943: hypothetical protein YajQ
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_25965 AsnC family transcriptional regulator 0.84 AO356_17960 nucleotide-binding protein
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_1065 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.84 Pf6N2E2_5522 FIG001943: hypothetical protein YajQ low > 103
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_22665 AsnC family transcriptional regulator 0.83 AO353_03640 nucleotide-binding protein low > 101
Pseudomonas sp. RS175 0.87 PFR28_02157 HTH-type transcriptional regulator LrpC 0.85 PFR28_03425 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.85 OH686_03725 Transcriptional regulator, AsnC family 0.77 OH686_08210 UPF0234 protein Yitk low > 80
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS15180 Lrp/AsnC family transcriptional regulator 0.83 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS15180 Lrp/AsnC family transcriptional regulator 0.83 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein low > 109
Pseudomonas simiae WCS417 0.80 PS417_13660 AsnC family transcriptional regulator 0.84 PS417_22510 nucleotide-binding protein
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS19780 Lrp/AsnC family transcriptional regulator 0.47 ABZR87_RS00820 YajQ family cyclic di-GMP-binding protein low > 80
Acidovorax sp. GW101-3H11 0.63 Ac3H11_2191 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.44 Ac3H11_2620 FIG001943: hypothetical protein YajQ
Serratia liquefaciens MT49 0.61 IAI46_07450 Lrp/AsnC family transcriptional regulator 0.48 IAI46_04955 YajQ family cyclic di-GMP-binding protein low > 86
Klebsiella michiganensis M5al 0.58 BWI76_RS17310 AsnC family transcriptional regulator 0.49 BWI76_RS06410 YajQ family cyclic di-GMP-binding protein low > 92
Enterobacter sp. TBS_079 0.58 MPMX20_02599 HTH-type transcriptional regulator LrpC 0.50 MPMX20_01017 hypothetical protein low > 85
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS01030 Lrp/AsnC family transcriptional regulator 0.39 QEN71_RS02775 YajQ family cyclic di-GMP-binding protein
Enterobacter asburiae PDN3 0.57 EX28DRAFT_0856 Transcriptional regulators 0.49 EX28DRAFT_2545 Uncharacterized protein conserved in bacteria low > 76
Paraburkholderia graminis OAS925 0.56 ABIE53_000567 Lrp/AsnC family leucine-responsive transcriptional regulator 0.40 ABIE53_003357 uncharacterized protein YajQ (UPF0234 family)
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_02107 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein 0.40 H281DRAFT_04122 hypothetical protein
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS02100 AsnC family transcriptional regulator 0.40 BPHYT_RS15930 nucleotide-binding protein
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS14370 Lrp/AsnC family transcriptional regulator 0.49 LRK54_RS14675 YajQ family cyclic di-GMP-binding protein low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS14090 Lrp/AsnC family transcriptional regulator 0.49 LRK55_RS14390 YajQ family cyclic di-GMP-binding protein low > 63
Variovorax sp. SCN45 0.34 GFF1041 Transcriptional regulator, AsnC family 0.46 GFF3099 UPF0234 protein Yitk
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS20675 AsnC family transcriptional regulator 0.41 RR42_RS17155 nucleotide-binding protein
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS10020 Lrp/AsnC family transcriptional regulator 0.45 RALBFv3_RS05160 YajQ family cyclic di-GMP-binding protein low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4299 transcriptional regulator, AsnC family 0.81 Psyr_4087 Protein of unknown function DUF520
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4299 transcriptional regulator, AsnC family 0.81 Psyr_4087 Protein of unknown function DUF520 low > 86
Ralstonia solanacearum UW163 0.32 UW163_RS03560 Lrp/AsnC family transcriptional regulator 0.45 UW163_RS08465 YajQ family cyclic di-GMP-binding protein
Ralstonia solanacearum GMI1000 0.32 RS_RS00630 Lrp/AsnC family transcriptional regulator 0.43 RS_RS12780 nucleotide-binding protein low > 80
Ralstonia solanacearum PSI07 0.32 RPSI07_RS23350 Lrp/AsnC family transcriptional regulator 0.44 RPSI07_RS12140 YajQ family cyclic di-GMP-binding protein
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_13155 AsnC family transcriptional regulator 0.48 OKGIIK_03500 yajQ YajQ family cyclic di-GMP-binding protein low > 52
Mycobacterium tuberculosis H37Rv 0.28 Rv3291c Probable transcriptional regulatory protein LrpA (Lrp/AsnC-family) 0.38 Rv0566c Conserved protein low > 58

Not shown: 2 genomes with orthologs for PP_4308 only; 48 genomes with orthologs for PP_1352 only