Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_4058 | | 1,4-alpha-glucan branching enzyme | 1.0 | PP_1319 | | Ubiquinol--cytochrome c reductase, cytochrome c1 | 0.36 | 16 |
Pseudomonas sp. RS175 | 0.79 | PFR28_01319 | | 1,4-alpha-glucan branching enzyme GlgB | 0.90 | PFR28_03604 | | Ammonia monooxygenase gamma subunit | — | — |
Pseudomonas fluorescens GW456-L13 | 0.79 | PfGW456L13_3253 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.90 | PfGW456L13_1636 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 87 |
Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_4678 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.88 | Pf1N1B4_960 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | 0.30 | 49 |
Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_01245 | | glycogen branching protein | 0.90 | AO356_17075 | | cytochrome C | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_2117 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.89 | Pf6N2E2_5339 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | 0.29 | 85 |
Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_22945 | | glycogen branching protein | 0.87 | AO353_15255 | | cytochrome C | — | — |
Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS13485 | | 1,4-alpha-glucan branching protein GlgB | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS13485 | | 1,4-alpha-glucan branching protein GlgB | 0.85 | PFLU_RS04205 | | cytochrome c1 | 0.42 | 26 |
Pseudomonas simiae WCS417 | 0.77 | PS417_12805 | | glycogen branching protein | 0.85 | PS417_04165 | | cytochrome C | — | — |
Pseudomonas stutzeri RCH2 | 0.69 | Psest_2158 | | alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | 0.79 | Psest_3277 | | Cytochrome c1 | — | — |
Pseudomonas sp. S08-1 | 0.68 | OH686_01540 | | 1,4-alpha-glucan branching enzyme | 0.89 | OH686_08380 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | — | — |
Ralstonia sp. UNC404CL21Col | 0.60 | ABZR87_RS17215 | | 1,4-alpha-glucan branching protein GlgB | 0.39 | ABZR87_RS02375 | | cytochrome c1 | low | > 80 |
Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS33780 | | glycogen branching protein | 0.36 | BPHYT_RS17620 | | cytochrome C | low | > 109 |
Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS17730 | | 1,4-alpha-glucan branching protein GlgB | 0.35 | QEN71_RS27775 | | cytochrome c1 | — | — |
Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS12510 | | glycogen branching protein | 0.37 | HSERO_RS20235 | | cytochrome C | low | > 78 |
Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS00885 | | 1,4-alpha-glucan branching protein GlgB | 0.39 | RPSI07_RS10515 | | cytochrome c | low | > 81 |
Paraburkholderia graminis OAS925 | 0.59 | ABIE53_004826 | | 1,4-alpha-glucan branching enzyme | 0.37 | ABIE53_003683 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit | low | > 113 |
Ralstonia solanacearum GMI1000 | 0.59 | RS_RS18305 | | glycogen-branching enzyme | 0.40 | RS_RS14665 | | cytochrome c | low | > 80 |
Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_06050 | | 1,4-alpha-glucan branching enzyme | 0.37 | H281DRAFT_05671 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.186.1 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.40 | Xcc-8004.2230.1 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 74 |
Azospirillum sp. SherDot2 | 0.54 | MPMX19_03849 | | 1,4-alpha-glucan branching enzyme GlgB | 0.13 | MPMX19_05014 | | Cytochrome c1 | — | — |
Variovorax sp. OAS795 | 0.52 | ABID97_RS04550 | | 1,4-alpha-glucan branching protein GlgB | 0.29 | ABID97_RS22975 | | cytochrome c1 | low | > 91 |
Variovorax sp. SCN45 | 0.51 | GFF6333 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.31 | GFF6696 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | low | > 127 |
Shewanella oneidensis MR-1 | 0.50 | SO1494 | glgB | 1,4-alpha-glucan branching enzyme (NCBI ptt file) | 0.48 | SO0610 | petC | ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) | low | > 76 |
Shewanella amazonensis SB2B | 0.50 | Sama_2453 | | 1,4-alpha-glucan branching enzyme (RefSeq) | 0.48 | Sama_3019 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) | low | > 62 |
Shewanella sp. ANA-3 | 0.50 | Shewana3_2934 | | glycogen branching enzyme (RefSeq) | 0.48 | Shewana3_0603 | | cytochrome c1 (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.48 | Shew_1168 | | glycogen branching enzyme (RefSeq) | 0.45 | Shew_0572 | | cytochrome c1 (RefSeq) | — | — |
Marinobacter adhaerens HP15 | 0.48 | HP15_1712 | | glycogen branching enzyme | 0.51 | HP15_547 | | ubiquinol-cytochrome c reductase, cytochrome c1 | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_14125 | | 1,4-alpha-glucan branching enzyme | 0.47 | CSW01_03055 | | cytochrome c1 | low | > 62 |
Alteromonas macleodii MIT1002 | 0.44 | MIT1002_02399 | | 1,4-alpha-glucan branching enzyme GlgB | 0.48 | MIT1002_00816 | | Cytochrome c1 precursor | — | — |
Not shown: 47 genomes with orthologs for PP_4058 only; 13 genomes with orthologs for PP_1319 only