Conservation of cofitness between PP_4058 and PP_1319 in Pseudomonas putida KT2440

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4058 1,4-alpha-glucan branching enzyme 1.0 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.36 16
Pseudomonas sp. RS175 0.79 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB 0.90 PFR28_03604 Ammonia monooxygenase gamma subunit
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.90 PfGW456L13_1636 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 87
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.88 Pf1N1B4_960 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit 0.30 49
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_01245 glycogen branching protein 0.90 AO356_17075 cytochrome C low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.89 Pf6N2E2_5339 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit 0.29 85
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_22945 glycogen branching protein 0.87 AO353_15255 cytochrome C
Pseudomonas fluorescens SBW25 0.77 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.85 PFLU_RS04205 cytochrome c1 low > 109
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.85 PFLU_RS04205 cytochrome c1 0.42 26
Pseudomonas simiae WCS417 0.77 PS417_12805 glycogen branching protein 0.85 PS417_04165 cytochrome C
Pseudomonas stutzeri RCH2 0.69 Psest_2158 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 0.79 Psest_3277 Cytochrome c1
Pseudomonas sp. S08-1 0.68 OH686_01540 1,4-alpha-glucan branching enzyme 0.89 OH686_08380 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB 0.39 ABZR87_RS02375 cytochrome c1 low > 80
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS33780 glycogen branching protein 0.36 BPHYT_RS17620 cytochrome C low > 109
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB 0.35 QEN71_RS27775 cytochrome c1
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12510 glycogen branching protein 0.37 HSERO_RS20235 cytochrome C low > 78
Ralstonia solanacearum PSI07 0.59 RPSI07_RS00885 1,4-alpha-glucan branching protein GlgB 0.39 RPSI07_RS10515 cytochrome c low > 81
Paraburkholderia graminis OAS925 0.59 ABIE53_004826 1,4-alpha-glucan branching enzyme 0.37 ABIE53_003683 ubiquinol-cytochrome c reductase cytochrome c1 subunit low > 113
Ralstonia solanacearum GMI1000 0.59 RS_RS18305 glycogen-branching enzyme 0.40 RS_RS14665 cytochrome c low > 80
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_06050 1,4-alpha-glucan branching enzyme 0.37 H281DRAFT_05671 ubiquinol-cytochrome c reductase cytochrome c1 subunit
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.186.1 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.40 Xcc-8004.2230.1 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 74
Azospirillum sp. SherDot2 0.54 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB 0.13 MPMX19_05014 Cytochrome c1
Variovorax sp. OAS795 0.52 ABID97_RS04550 1,4-alpha-glucan branching protein GlgB 0.29 ABID97_RS22975 cytochrome c1 low > 91
Variovorax sp. SCN45 0.51 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.31 GFF6696 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit low > 127
Shewanella oneidensis MR-1 0.50 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file) 0.48 SO0610 petC ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.50 Sama_2453 1,4-alpha-glucan branching enzyme (RefSeq) 0.48 Sama_3019 ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) low > 62
Shewanella sp. ANA-3 0.50 Shewana3_2934 glycogen branching enzyme (RefSeq) 0.48 Shewana3_0603 cytochrome c1 (RefSeq) low > 73
Shewanella loihica PV-4 0.48 Shew_1168 glycogen branching enzyme (RefSeq) 0.45 Shew_0572 cytochrome c1 (RefSeq)
Marinobacter adhaerens HP15 0.48 HP15_1712 glycogen branching enzyme 0.51 HP15_547 ubiquinol-cytochrome c reductase, cytochrome c1
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_14125 1,4-alpha-glucan branching enzyme 0.47 CSW01_03055 cytochrome c1 low > 62
Alteromonas macleodii MIT1002 0.44 MIT1002_02399 1,4-alpha-glucan branching enzyme GlgB 0.48 MIT1002_00816 Cytochrome c1 precursor

Not shown: 47 genomes with orthologs for PP_4058 only; 13 genomes with orthologs for PP_1319 only