Conservation of cofitness between PP_3539 and PP_0428 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3539 putative Transcriptional regulator 1.0 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase 0.16 7
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_2595 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.85 PfGW456L13_1228 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 87
Pseudomonas sp. RS175 0.85 PFR28_01263 HTH-type transcriptional regulator CueR 0.88 PFR28_04038 Purine nucleoside phosphoramidase low > 88
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2188 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.88 Pf6N2E2_4831 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 103
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_3991 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.87 Pf1N1B4_2554 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 87
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_01565 MerR family transcriptional regulator 0.86 AO356_14465 zinc-binding protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_20370 MerR family transcriptional regulator 0.87 AO353_07180 zinc-binding protein low > 101
Pseudomonas simiae WCS417 0.82 PS417_17000 MerR family transcriptional regulator 0.96 PS417_25685 zinc-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS18950 MerR family DNA-binding transcriptional regulator 0.90 PFLU_RS27340 histidine triad nucleotide-binding protein low > 109
Pseudomonas fluorescens SBW25 0.82 PFLU_RS18950 MerR family DNA-binding transcriptional regulator 0.90 PFLU_RS27340 histidine triad nucleotide-binding protein 0.59 71
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2472 transcriptional regulator, MerR family 0.88 Psyr_4573 Histidine triad (HIT) protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2472 transcriptional regulator, MerR family 0.88 Psyr_4573 Histidine triad (HIT) protein low > 86
Pseudomonas sp. S08-1 0.76 OH686_00860 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.76 OH686_15165 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_1075 Predicted transcriptional regulators 0.76 Psest_3643 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 67
Marinobacter adhaerens HP15 0.57 HP15_1006 transcriptional regulator, MerR family 0.63 HP15_3384 HIT (histidine triad) family protein low > 73
Shewanella sp. ANA-3 0.56 Shewana3_1673 MerR family transcriptional regulator (RefSeq) 0.48 Shewana3_2507 histidine triad (HIT) protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO1898 transcriptional regulator, putative (NCBI ptt file) 0.49 SO2723 HIT family protein (NCBI ptt file)
Shewanella amazonensis SB2B 0.56 Sama_1363 MerR family transcriptional regulator (RefSeq) 0.48 Sama_1448 HIT family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.54 Shew_2569 MerR family transcriptional regulator (RefSeq) 0.49 Shew_1731 histidine triad (HIT) protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.49 MIT1002_01670 Zn(II)-responsive regulator of zntA 0.64 MIT1002_00744 HIT-like protein low > 70
Rhodospirillum rubrum S1H 0.45 Rru_A1994 Transcriptional Regulator, MerR family (NCBI) 0.37 Rru_A3592 Histidine triad (HIT) protein (NCBI)
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_2513 Predicted transcriptional regulators 0.49 B158DRAFT_0741 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 40
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS00860 MerR family transcriptional regulator 0.47 RR42_RS18865 hydrolase low > 128
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2989 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.45 Ac3H11_4739 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 79
Azospirillum sp. SherDot2 0.39 MPMX19_01355 hypothetical protein 0.27 MPMX19_02540 Purine nucleoside phosphoramidase low > 112
Azospirillum brasilense Sp245 0.39 AZOBR_RS10195 MerR family transcriptional regulator 0.30 AZOBR_RS01695 hypothetical protein low > 97
Castellaniella sp019104865 MT123 0.38 ABCV34_RS12375 MerR family DNA-binding transcriptional regulator 0.42 ABCV34_RS11265 histidine triad nucleotide-binding protein
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS23435 MerR family transcriptional regulator 0.48 HSERO_RS20300 HIT family hydrolase
Dinoroseobacter shibae DFL-12 0.32 Dshi_0840 transcriptional regulator, MerR family (RefSeq) 0.28 Dshi_0679 histidine triad (HIT) protein (RefSeq) low > 64

Not shown: 3 genomes with orthologs for PP_3539 only; 48 genomes with orthologs for PP_0428 only