Conservation of cofitness between PP_2903 and PP_0248 in Pseudomonas putida KT2440

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 1.0 PP_0248 Probable alpha-L-glutamate ligase 0.28 16
Pseudomonas sp. RS175 0.81 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 0.96 PFR28_04870 Ribosomal protein S6--L-glutamate ligase low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.96 Pf6N2E2_3903 Ribosomal protein S6 glutaminyl transferase — —
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_01015 peptidylprolyl isomerase 0.96 AO356_10160 ribosomal protein S6 modification protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.95 Psyr_0173 SSU ribosomal protein S6P modification protein low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.95 Psyr_0173 SSU ribosomal protein S6P modification protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.96 Pf1N1B4_1774 Ribosomal protein S6 glutaminyl transferase low > 87
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.96 PfGW456L13_425 Ribosomal protein S6 glutaminyl transferase low > 87
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_27825 peptidylprolyl isomerase 0.95 AO353_11755 ribosomal protein S6 modification protein low > 101
Pseudomonas fluorescens SBW25 0.76 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.96 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.96 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase low > 109
Pseudomonas simiae WCS417 0.75 PS417_16900 peptidylprolyl isomerase 0.96 PS417_01180 ribosomal protein S6 modification protein — —
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS06115 peptidylprolyl isomerase 0.13 QEN71_RS34085 RimK family alpha-L-glutamate ligase — —
Pseudomonas stutzeri RCH2 0.70 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.93 Psest_3993 alpha-L-glutamate ligases, RimK family low > 67
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00543 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) 0.14 H281DRAFT_01302 SSU ribosomal protein S6P modification protein low > 103
Rahnella sp. WP5 0.68 EX31_RS22640 peptidylprolyl isomerase B 0.66 EX31_RS09640 30S ribosomal protein S6--L-glutamate ligase — —
Marinobacter adhaerens HP15 0.68 HP15_2190 peptidyl-prolyl cis-trans isomerase B 0.77 HP15_719 alpha-L-glutamate ligase, RimK family low > 73
Pseudomonas sp. S08-1 0.68 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB 0.93 OH686_11080 Ribosomal protein S6--L-glutamate ligase low > 80
Serratia liquefaciens MT49 0.65 IAI46_05385 peptidylprolyl isomerase B 0.68 IAI46_08360 30S ribosomal protein S6--L-glutamate ligase low > 86
Pantoea sp. MT58 0.65 IAI47_14340 peptidylprolyl isomerase B 0.63 IAI47_13055 30S ribosomal protein S6--L-glutamate ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.64 GFF756 Ribosomal protein S6 glutaminyl transferase — —
Escherichia coli ECRC101 0.64 MCAODC_27045 ppiB peptidylprolyl isomerase B 0.66 MCAODC_25185 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia fergusonii Becca 0.64 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B 0.66 EFB2_03209 Ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECOR38 0.64 HEPCGN_06465 ppiB peptidylprolyl isomerase B 0.66 HEPCGN_02060 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Enterobacter sp. TBS_079 0.64 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B 0.64 MPMX20_01493 Ribosomal protein S6--L-glutamate ligase low > 85
Escherichia coli Nissle 1917 0.64 ECOLIN_RS03045 peptidylprolyl isomerase B 0.66 ECOLIN_RS04535 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECRC98 0.64 JDDGAC_11475 ppiB peptidylprolyl isomerase B 0.66 JDDGAC_09605 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Klebsiella michiganensis M5al 0.64 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase 0.64 BWI76_RS09450 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECRC99 0.64 KEDOAH_20145 ppiB peptidylprolyl isomerase B 0.66 KEDOAH_21940 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECRC62 0.64 BNILDI_22245 ppiB peptidylprolyl isomerase B 0.66 BNILDI_20595 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECRC101 0.64 OKFHMN_07825 ppiB peptidylprolyl isomerase B 0.66 OKFHMN_05970 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECRC102 0.64 NIAGMN_05880 ppiB peptidylprolyl isomerase B 0.66 NIAGMN_04015 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1021 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.66 B158DRAFT_2473 alpha-L-glutamate ligases, RimK family low > 40
Variovorax sp. OAS795 0.64 ABID97_RS17860 peptidylprolyl isomerase 0.11 ABID97_RS12585 RimK family alpha-L-glutamate ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B 0.66 OHPLBJKB_02816 Ribosomal protein S6--L-glutamate ligase — —
Escherichia coli ECOR27 0.64 NOLOHH_00815 ppiB peptidylprolyl isomerase B 0.66 NOLOHH_22340 rimK 30S ribosomal protein S6--L-glutamate ligase — —
Escherichia coli BW25113 0.64 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) 0.66 b0852 rimK ribosomal protein S6 modification protein (NCBI) — —
Escherichia coli BL21 0.64 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.66 ECD_00857 ribosomal protein S6 modification protein — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.64 EX28DRAFT_2101 alpha-L-glutamate ligase, RimK family — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS06485 peptidylprolyl isomerase B 0.66 HER17_RS12510 30S ribosomal protein S6--L-glutamate ligase — —
Shewanella sp. ANA-3 0.62 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) 0.74 Shewana3_2274 SSU ribosomal protein S6P modification protein (RefSeq) — —
Dickeya dadantii 3937 0.62 DDA3937_RS15095 peptidylprolyl isomerase B 0.66 DDA3937_RS09450 30S ribosomal protein S6--L-glutamate ligase — —
Dickeya dianthicola ME23 0.62 DZA65_RS15980 peptidylprolyl isomerase B 0.66 DZA65_RS09780 30S ribosomal protein S6--L-glutamate ligase — —
Shewanella oneidensis MR-1 0.62 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) 0.75 SO2270 rimK-2 ribosomal protein S6 modification protein (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.61 HGI48_RS15175 peptidylprolyl isomerase B 0.66 HGI48_RS09470 30S ribosomal protein S6--L-glutamate ligase low > 71
Shewanella loihica PV-4 0.61 Shew_2512 peptidylprolyl isomerase (RefSeq) 0.73 Shew_3664 alpha-L-glutamate ligase (RefSeq) — —
Alteromonas macleodii MIT1002 0.61 MIT1002_02501 Peptidyl-prolyl cis-trans isomerase B 0.74 MIT1002_03511 Alpha-aminoadipate--LysW ligase LysX low > 70
Shewanella amazonensis SB2B 0.59 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) 0.75 Sama_1299 ribosomal protein S6 modification protein (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_09260 peptidylprolyl isomerase 0.80 CSW01_11610 30S ribosomal protein S6--L-glutamate ligase low > 62

Not shown: 22 genomes with orthologs for PP_2903 only; 8 genomes with orthologs for PP_0248 only